back VSX2_si HOCOMOCO-build9-MAR2012


UniProt VSX2
motif weight23.0
total sequences23
data sources TRANSFAC20112:23
motif logo
consensusTAATTAGCnhd
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
       0.0     1.9261        0.0    21.0739 
   21.3005        0.0     1.6995        0.0 
      23.0        0.0        0.0        0.0 
       0.0        0.0        0.0       23.0 
       0.0        0.0     1.0197    21.9803 
   20.9606     1.0197     1.0197        0.0 
       0.0        0.0       23.0        0.0 
       0.0    20.2808     2.7192        0.0 
    4.0788     4.0788     4.7586    10.0837 
     9.064     4.7586     2.0394     7.1379 
    9.4323     2.2943     4.3337     6.9397 
PPM
     A          C          G          T    
       0.0     0.0837        0.0     0.9163 
    0.9261        0.0     0.0739        0.0 
       1.0        0.0        0.0        0.0 
       0.0        0.0        0.0        1.0 
       0.0        0.0     0.0443     0.9557 
    0.9113     0.0443     0.0443        0.0 
       0.0        0.0        1.0        0.0 
       0.0     0.8818     0.1182        0.0 
    0.1773     0.1773     0.2069     0.4384 
    0.3941     0.2069     0.0887     0.3103 
    0.4101     0.0998     0.1884     0.3017 
PWM uniform
     A          C          G          T    
   -2.1205    -0.8801    -2.1205     1.2076 
    1.2179    -2.1205    -0.9674    -2.1205 
     1.292    -2.1205    -2.1205    -2.1205 
   -2.1205    -2.1205    -2.1205      1.292 
   -2.1205    -2.1205    -1.2872     1.2482 
    1.2024    -1.2872    -1.2872    -2.1205 
   -2.1205    -2.1205      1.292    -2.1205 
   -2.1205     1.1706    -0.6234    -2.1205 
   -0.2954    -0.2954    -0.1646     0.5088 
    0.4103    -0.1646    -0.8391     0.1926 
     0.447    -0.7527    -0.2443     0.1673 
PWM hg19
     A          C          G          T    
   -2.1205    -0.7466    -2.1205     1.0589 
    1.0691    -2.1205    -0.8386    -2.1205 
    1.1428    -2.1205    -2.1205    -2.1205 
   -2.1205    -2.1205    -2.1205     1.1428 
   -2.1205    -2.1205    -1.1797     1.0993 
    1.0537    -1.1797    -1.1797    -2.1205 
   -2.1205    -2.1205     1.4695    -2.1205 
   -2.1205     1.3474    -0.4785    -2.1205 
   -0.4235    -0.1397    -0.0055     0.3661 
    0.2688    -0.0055    -0.7036     0.0544 
    0.3051    -0.6131    -0.0872     0.0294