back USF1_f1 HOCOMOCO-build9-MAR2012


UniProt USF1
motif weight1730.80627
total sequences2224
data sources HUDSONALPHACHIPSEQV2:2000
JASPAR:30
TRANSFAC20112:194
motif logo
consensusRGTCACGTGv
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
  398.8138   195.5222  1008.1655   128.3048 
   281.652     8.3003   1440.854        0.0 
   30.1739   191.1749    41.2227  1468.2348 
       0.0  1727.6495     3.1568        0.0 
 1730.3099     0.4964        0.0        0.0 
    4.0587  1623.1091    40.9619    62.6766 
  146.9477      9.302  1574.5566        0.0 
    8.1501     4.5257     8.1436  1709.9869 
       0.0        0.0  1730.8063        0.0 
  626.3252   229.9764   719.8466   154.6581 
PPM
     A          C          G          T    
    0.2304      0.113     0.5825     0.0741 
    0.1627     0.0048     0.8325        0.0 
    0.0174     0.1105     0.0238     0.8483 
       0.0     0.9982     0.0018        0.0 
    0.9997     0.0003        0.0        0.0 
    0.0023     0.9378     0.0237     0.0362 
    0.0849     0.0054     0.9097        0.0 
    0.0047     0.0026     0.0047      0.988 
       0.0        0.0        1.0        0.0 
    0.3619     0.1329     0.4159     0.0894 
PWM uniform
     A          C          G          T    
   -0.0812    -0.7892     0.8434    -1.2055 
   -0.4271    -3.7555     1.1999    -5.4516 
   -2.6074    -0.8115    -2.3111     1.2187 
   -5.4516     1.3812    -4.4607    -5.4516 
    1.3828    -5.2155    -5.4516    -5.4516 
   -4.2955     1.3189    -2.3172    -1.9071 
   -1.0717    -3.6615     1.2886    -5.4516 
   -3.7703    -4.2197     -3.771      1.371 
   -5.4516    -5.4516     1.3831    -5.4516 
    0.3685    -0.6283     0.5073    -1.0211 
PWM hg19
     A          C          G          T    
   -0.2351    -0.6077     1.0261    -1.3578 
   -0.5806    -3.6036     1.3828    -5.4516 
   -2.7524      -0.63    -2.1354     1.0643 
   -5.4516     1.5641    -4.3418    -5.4516 
    1.2283    -5.1741    -5.4516    -5.4516 
   -4.3989     1.5017    -2.1415    -2.0569 
   -1.2242    -3.5067     1.4714    -5.4516 
   -3.8943    -4.0866    -3.6196     1.2165 
   -5.4516    -5.4516     1.5659    -5.4516 
    0.2143    -0.4466     0.6899    -1.1738