| UniProt |
TBP
|
| motif weight | 101.0 |
| total sequences | 111 |
| data sources |
TRANSFAC20112:111
|
| motif logo |
|
| consensus | vvKATAWAWdv |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
33.3809 15.8773 41.8961 9.8457
31.1042 21.7611 46.0059 2.1288
8.7518 8.7518 17.267 66.2295
76.4005 4.7307 0.5913 19.2775
11.3536 1.5375 8.7518 79.3571
94.4953 0.5913 5.9133 0.0
65.4016 0.0 2.3653 33.233
87.1628 0.5913 8.7518 4.4941
40.6838 2.7201 9.8162 47.7799
32.1686 10.4075 25.4274 32.9965
20.2237 41.7482 28.7389 10.2892
|
| PPM | A C G T
0.3305 0.1572 0.4148 0.0975
0.308 0.2155 0.4555 0.0211
0.0867 0.0867 0.171 0.6557
0.7564 0.0468 0.0059 0.1909
0.1124 0.0152 0.0867 0.7857
0.9356 0.0059 0.0585 0.0
0.6475 0.0 0.0234 0.329
0.863 0.0059 0.0867 0.0445
0.4028 0.0269 0.0972 0.4731
0.3185 0.103 0.2518 0.3267
0.2002 0.4133 0.2845 0.1019
|
| PWM uniform | A C G T
0.2685 -0.4385 0.4889 -0.8757
0.2003 -0.1417 0.58 -2.0849
-0.9804 -0.9804 -0.36 0.9369
1.0775 -1.5012 -2.7167 -0.2564
-0.7472 -2.2835 -0.9804 1.1149
1.2872 -2.7167 -1.3181 -3.1305
0.9245 -3.1305 -2.0153 0.2642
1.2074 -2.7167 -0.9804 -1.5422
0.4603 -1.9192 -0.8783 0.617
0.2327 -0.8258 0.0067 0.2573
-0.2112 0.4854 0.1241 -0.8361
|
| PWM hg19 | A C G T
0.1194 -0.2668 0.6674 -1.0129
0.0516 0.0329 0.759 -2.1824
-1.1158 -0.8171 -0.1875 0.7851
0.9253 -1.3515 -2.6508 -0.4017
-0.8865 -2.1749 -0.8171 0.9626
1.1345 -2.6508 -1.1627 -3.1305
0.7728 -3.1305 -1.8887 0.1151
1.0549 -2.6508 -0.8171 -1.6633
0.3102 -1.7873 -0.7131 0.4662
0.0838 -0.6596 0.1824 0.1082
-0.3568 0.6639 0.3007 -0.9741
|
