back SPI1_si HOCOMOCO-build9-MAR2012


UniProt SPI1
motif weight3283.95915
total sequences4158
data sources HUDSONALPHACHIPSEQV2:3906
JASPAR:42
TRANSFAC20112:210
motif logo
consensusvvRRWRRGGAASTRRvd
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
 1201.6661   612.8795   986.3313   483.0822 
 1612.3298   333.7271  1148.3614   189.5409 
 2230.9863    125.565   507.4976   419.9103 
 2504.2992    62.3685    391.742   325.5494 
 2140.8313    14.9457   481.0385   647.1436 
  354.8723   314.4276   2583.485    31.1743 
 2285.3895   303.9147   690.5583     4.0966 
   406.123        0.0  2874.7793     3.0568 
   15.6753     4.5637  3262.7061     1.0141 
  3270.802        0.0    10.1147     3.0424 
 3221.8615        0.0    40.2126    21.8851 
  256.7943   616.4411  2402.5397     8.1839 
  200.4874   160.9765   182.8705  2739.6247 
  349.4435   147.2297  2635.6422   151.6438 
 1821.5793    296.922   979.1971   186.2608 
 1463.3572    433.229  1075.8587   311.5142 
  1838.338    411.125   603.1933   431.3029 
PPM
     A          C          G          T    
    0.3659     0.1866     0.3003     0.1471 
     0.491     0.1016     0.3497     0.0577 
    0.6794     0.0382     0.1545     0.1279 
    0.7626      0.019     0.1193     0.0991 
    0.6519     0.0046     0.1465     0.1971 
    0.1081     0.0957     0.7867     0.0095 
    0.6959     0.0925     0.2103     0.0012 
    0.1237        0.0     0.8754     0.0009 
    0.0048     0.0014     0.9935     0.0003 
     0.996        0.0     0.0031     0.0009 
    0.9811        0.0     0.0122     0.0067 
    0.0782     0.1877     0.7316     0.0025 
    0.0611      0.049     0.0557     0.8342 
    0.1064     0.0448     0.8026     0.0462 
    0.5547     0.0904     0.2982     0.0567 
    0.4456     0.1319     0.3276     0.0949 
    0.5598     0.1252     0.1837     0.1313 
PWM uniform
     A          C          G          T    
    0.3802    -0.2915     0.1831    -0.5286 
    0.6737    -0.8966     0.3349    -1.4577 
    0.9981    -1.8642    -0.4795    -0.6681 
    1.1136     -2.548    -0.7372    -0.9213 
    0.9569    -3.8815    -0.5328    -0.2373 
   -0.8355    -0.9558     1.1447    -3.2105 
    1.0222    -0.9896    -0.1725    -4.9013 
   -0.7013    -6.0078     1.2515    -5.0875 
   -3.8394    -4.8277      1.378    -5.6017 
    1.3804    -6.0078    -4.2166    -5.0903 
    1.3654    -6.0078    -2.9697    -3.5387 
   -1.1568    -0.2857     1.0722    -4.3898 
   -1.4022    -1.6192    -1.4932     1.2033 
   -0.8509    -1.7073     1.1647    -1.6782 
    0.7956    -1.0127     0.1758     -1.475 
    0.5769     -0.637     0.2698    -0.9651 
    0.8047    -0.6892    -0.3074    -0.6415 
PWM hg19
     A          C          G          T    
    0.2258     -0.109     0.3658    -0.6826 
    0.5193    -0.7146     0.5176    -1.6106 
    0.8436    -1.6838    -0.2971     -0.822 
    0.9591    -2.3702     -0.555    -1.0749 
    0.8024    -3.7186    -0.3505    -0.3914 
   -0.9892    -0.7738     1.3276     -3.355 
    0.8677    -0.8077       0.01    -5.0021 
   -0.8552    -6.0078     1.4344    -5.1776 
   -3.9752    -4.6975     1.5609    -5.6507 
    1.2259    -6.0078    -4.0618    -5.1803 
    1.2108    -6.0078    -2.7947    -3.6793 
   -1.3102    -0.1032      1.255    -4.5118 
   -1.5552    -1.4383     -1.312     1.0488 
   -1.0046    -1.5266     1.3476    -1.8306 
    0.6411    -0.8308     0.3585    -1.6279 
    0.4225    -0.4548     0.4525    -1.1186 
    0.6503    -0.5069    -0.1249    -0.7954