back SOX18_f1 HOCOMOCO-build9-MAR2012


UniProt SOX18
motif weight8.0
total sequences9
data sources TRANSFAC20112:9
motif logo
consensusGRRnnWvRACAATKndWKS
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
    0.5205     0.5205     6.4384     0.5205 
    1.9726     0.9863     5.0411        0.0 
    5.0411     0.9863     1.9726        0.0 
    3.0685     2.9589     0.9863     0.9863 
    3.0685     0.9863     2.9589     0.9863 
    5.0411        0.0     0.9863     1.9726 
    2.0822     1.9726     2.9589     0.9863 
    4.9315        0.0     2.0822     0.9863 
    6.0274        0.0        0.0     1.9726 
       0.0        8.0        0.0        0.0 
       8.0        0.0        0.0        0.0 
       8.0        0.0        0.0        0.0 
    2.9589        0.0        0.0     5.0411 
       0.0     0.9863     3.9452     3.0685 
    0.9863     1.9726     3.0685     1.9726 
    1.9726     0.9863     2.9589     2.0822 
    2.9589     0.9863        0.0     4.0548 
    1.9726        0.0     2.9589     3.0685 
    0.2466     4.3014     2.2192     1.2329 
PPM
     A          C          G          T    
    0.0651     0.0651     0.8048     0.0651 
    0.2466     0.1233     0.6301        0.0 
    0.6301     0.1233     0.2466        0.0 
    0.3836     0.3699     0.1233     0.1233 
    0.3836     0.1233     0.3699     0.1233 
    0.6301        0.0     0.1233     0.2466 
    0.2603     0.2466     0.3699     0.1233 
    0.6164        0.0     0.2603     0.1233 
    0.7534        0.0        0.0     0.2466 
       0.0        1.0        0.0        0.0 
       1.0        0.0        0.0        0.0 
       1.0        0.0        0.0        0.0 
    0.3699        0.0        0.0     0.6301 
       0.0     0.1233     0.4932     0.3836 
    0.1233     0.2466     0.3836     0.2466 
    0.2466     0.1233     0.3699     0.2603 
    0.3699     0.1233        0.0     0.5068 
    0.2466        0.0     0.3699     0.3836 
    0.0308     0.5377     0.2774     0.1541 
PWM uniform
     A          C          G          T    
   -0.8846    -0.8846     1.0157    -0.8846 
   -0.0109    -0.5146     0.7916    -1.5784 
    0.7916    -0.5146    -0.0109    -1.5784 
    0.3535     0.3225    -0.5146    -0.5146 
    0.3535    -0.5146     0.3225    -0.5146 
    0.7916    -1.5784    -0.5146    -0.0109 
    0.0321    -0.0109     0.3225    -0.5146 
    0.7717    -1.5784     0.0321    -0.5146 
    0.9548    -1.5784    -1.5784    -0.0109 
   -1.5784     1.2182    -1.5784    -1.5784 
    1.2182    -1.5784    -1.5784    -1.5784 
    1.2182    -1.5784    -1.5784    -1.5784 
    0.3225    -1.5784    -1.5784     0.7916 
   -1.5784    -0.5146     0.5721     0.3535 
   -0.5146    -0.0109     0.3535    -0.0109 
   -0.0109    -0.5146     0.3225     0.0321 
    0.3225    -0.5146    -1.5784     0.5963 
   -0.0109    -1.5784     0.3225     0.3535 
   -1.1902     0.6488     0.0834     -0.363 
PWM hg19
     A          C          G          T    
    -0.959    -0.7888     1.1862     -0.959 
   -0.1313    -0.3911     0.9588    -1.5784 
    0.6524    -0.3911     0.1366    -1.5784 
    0.2228     0.4802    -0.3911    -0.6132 
    0.2228    -0.3911     0.4802    -0.6132 
    0.6524    -1.5784    -0.3911    -0.1313 
   -0.0897     0.1366     0.4802    -0.6132 
    0.6328    -1.5784     0.1811    -0.6132 
    0.8134    -1.5784    -1.5784    -0.1313 
   -1.5784      1.391    -1.5784    -1.5784 
    1.0737    -1.5784    -1.5784    -1.5784 
    1.0737    -1.5784    -1.5784    -1.5784 
    0.1925    -1.5784    -1.5784     0.6524 
   -1.5784    -0.3911     0.7355     0.2228 
   -0.6132     0.1366      0.512    -0.1313 
   -0.1313    -0.3911     0.4802    -0.0897 
    0.1925    -0.3911    -1.5784     0.4605 
   -0.1313    -1.5784     0.4802     0.2228 
   -1.2374     0.8137     0.2342    -0.4693