back SOX17_f2 HOCOMOCO-build9-MAR2012


UniProt SOX17
motif weight57.03021
total sequences67
data sources JASPAR:31
TRANSFAC20112:36
motif logo
consensusbSACAATRRdnWTTGKTK
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
    8.8238    16.0688    23.2104     8.9272 
    4.8647    11.7993    40.3662        0.0 
   57.0302        0.0        0.0        0.0 
       0.0    57.0302        0.0        0.0 
   57.0302        0.0        0.0        0.0 
   57.0302        0.0        0.0        0.0 
       0.0        0.0        0.0    57.0302 
   10.8678     1.9666    40.2627     3.9331 
   21.6321        0.0    20.7006    14.6975 
   18.7341     5.8997     17.699    14.6975 
   12.7309    15.7325    16.7675    11.7993 
   36.4331     5.8997        0.0    14.6975 
   11.7993     3.0016        0.0    42.2293 
       0.0        0.0     8.7978    48.2324 
       0.0        0.0    35.3981    21.6321 
    1.9666        0.0     17.699    37.3646 
       0.0     2.8981     8.9013    45.2308 
    4.5542     4.5542    39.4345     8.4873 
PPM
     A          C          G          T    
    0.1547     0.2818      0.407     0.1565 
    0.0853     0.2069     0.7078        0.0 
       1.0        0.0        0.0        0.0 
       0.0        1.0        0.0        0.0 
       1.0        0.0        0.0        0.0 
       1.0        0.0        0.0        0.0 
       0.0        0.0        0.0        1.0 
    0.1906     0.0345      0.706      0.069 
    0.3793        0.0      0.363     0.2577 
    0.3285     0.1034     0.3103     0.2577 
    0.2232     0.2759      0.294     0.2069 
    0.6388     0.1034        0.0     0.2577 
    0.2069     0.0526        0.0     0.7405 
       0.0        0.0     0.1543     0.8457 
       0.0        0.0     0.6207     0.3793 
    0.0345        0.0     0.3103     0.6552 
       0.0     0.0508     0.1561     0.7931 
    0.0799     0.0799     0.6915     0.1488 
PWM uniform
     A          C          G          T    
   -0.4399     0.1121     0.4614    -0.4294 
    -0.955    -0.1755     0.9969     -2.715 
    1.3354     -2.715     -2.715     -2.715 
    -2.715     1.3354     -2.715     -2.715 
    1.3354     -2.715     -2.715     -2.715 
    1.3354     -2.715     -2.715     -2.715 
    -2.715     -2.715     -2.715     1.3354 
    -0.251    -1.6347     0.9944    -1.1276 
    0.3941     -2.715     0.3521     0.0284 
    0.2571    -0.7927     0.2033     0.0284 
   -0.1053     0.0922     0.1522    -0.1755 
    0.8971    -0.7927     -2.715     0.0284 
   -0.1755    -1.3364     -2.715      1.041 
    -2.715     -2.715    -0.4425      1.171 
    -2.715     -2.715      0.869     0.3941 
   -1.6347     -2.715     0.2033     0.9216 
    -2.715    -1.3625     -0.432     1.1081 
   -1.0093    -1.0093     0.9742    -0.4747 
PWM hg19
     A          C          G          T    
   -0.5775     0.2852     0.6375    -0.5672 
   -1.0813    -0.0058     1.1759     -2.715 
    1.1836     -2.715     -2.715     -2.715 
    -2.715     1.5155     -2.715     -2.715 
    1.1836     -2.715     -2.715     -2.715 
    1.1836     -2.715     -2.715     -2.715 
    -2.715     -2.715     -2.715     1.1836 
   -0.3916    -1.5101     1.1734    -1.2486 
    0.2468     -2.715     0.5273    -0.1156 
     0.111    -0.6345     0.3772    -0.1156 
   -0.2478     0.2651     0.3257    -0.3171 
    0.7469    -0.6345     -2.715    -0.1156 
   -0.3171    -1.1964     -2.715     0.8902 
    -2.715     -2.715    -0.2769     1.0198 
    -2.715     -2.715     1.0474     0.2468 
   -1.7341     -2.715     0.3772     0.7714 
    -2.715    -1.2237    -0.2662     0.9571 
    -1.134    -0.8571      1.153    -0.6117