back RXRB_f1 HOCOMOCO-build9-MAR2012


UniProt RXRB
motif weight26.0
total sequences27
data sources TRANSFAC20112:27
motif logo
consensusWSAGGTCAbd
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
    3.7143     2.4762     3.5905     16.219 
    2.8476      9.781    13.3714        0.0 
   22.0381     1.7333     2.2286        0.0 
    1.1143        0.0    22.6571     2.2286 
       0.0     1.5476    21.9762     2.4762 
    1.1143        0.0     1.1143    23.7714 
    0.4333     22.719     1.7333     1.1143 
   24.8857     1.1143        0.0        0.0 
    2.4762    12.8762     7.9238     2.7238 
   10.3381      3.219     8.2333     4.2095 
PPM
     A          C          G          T    
    0.1429     0.0952     0.1381     0.6238 
    0.1095     0.3762     0.5143        0.0 
    0.8476     0.0667     0.0857        0.0 
    0.0429        0.0     0.8714     0.0857 
       0.0     0.0595     0.8452     0.0952 
    0.0429        0.0     0.0429     0.9143 
    0.0167     0.8738     0.0667     0.0429 
    0.9571     0.0429        0.0        0.0 
    0.0952     0.4952     0.3048     0.1048 
    0.3976     0.1238     0.3167     0.1619 
PWM uniform
     A          C          G          T    
   -0.4794    -0.7988    -0.5071     0.8453 
   -0.6918     0.3706     0.6624     -2.195 
    1.1392    -1.0546     -0.877     -2.195 
    -1.333     -2.195     1.1659     -0.877 
    -2.195    -1.1303     1.1365    -0.7988 
    -1.333     -2.195     -1.333     1.2123 
   -1.7684     1.1686    -1.0546     -1.333 
    1.2566     -1.333     -2.195     -2.195 
   -0.7988     0.6269     0.1779    -0.7262 
    0.4218    -0.5952     0.2127    -0.3756 
PWM hg19
     A          C          G          T    
   -0.6044     -0.658    -0.3555     0.6986 
   -0.8099     0.5407     0.8358     -2.195 
    0.9905    -0.9265    -0.7398     -2.195 
   -1.4194     -2.195     1.3431    -0.9879 
    -2.195    -1.0067     1.3135    -0.9129 
   -1.4194     -2.195    -1.2232     1.0632 
   -1.8195     1.3458    -0.9265    -1.4194 
    1.1073    -1.2232     -2.195     -2.195 
   -0.9129     0.7999     0.3452    -0.8431 
    0.2793    -0.4465     0.3805    -0.5035