| UniProt |
PTF1A
|
| motif weight | 10.0 |
| total sequences | 11 |
| data sources |
TRANSFAC20112:11
|
| motif logo |
|
| consensus | nRRGARAnnbhMCASSTGYCM |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
2.0918 4.6429 1.1735 2.0918
4.3878 0.0 3.7755 1.8367
1.8367 1.0204 7.1429 0.0
0.0 1.8367 8.1633 0.0
5.6122 0.0 4.3878 0.0
7.1429 1.0204 1.8367 0.0
8.9796 0.0 0.0 1.0204
2.6531 3.6735 1.7347 1.9388
3.6735 1.7347 0.9184 3.6735
0.9184 3.5714 4.4898 1.0204
4.5918 2.7551 0.9184 1.7347
6.3265 1.9388 1.7347 0.0
1.0204 8.9796 0.0 0.0
8.1633 0.0 0.0 1.8367
0.0 2.7551 5.5102 1.7347
1.9388 5.3061 2.7551 0.0
1.8367 0.0 0.0 8.1633
0.0 0.0 10.0 0.0
1.7347 3.6735 0.0 4.5918
0.0 5.2041 4.7959 0.0
2.5255 5.2806 0.6888 1.5051
|
| PPM | A C G T
0.2092 0.4643 0.1173 0.2092
0.4388 0.0 0.3776 0.1837
0.1837 0.102 0.7143 0.0
0.0 0.1837 0.8163 0.0
0.5612 0.0 0.4388 0.0
0.7143 0.102 0.1837 0.0
0.898 0.0 0.0 0.102
0.2653 0.3673 0.1735 0.1939
0.3673 0.1735 0.0918 0.3673
0.0918 0.3571 0.449 0.102
0.4592 0.2755 0.0918 0.1735
0.6327 0.1939 0.1735 0.0
0.102 0.898 0.0 0.0
0.8163 0.0 0.0 0.1837
0.0 0.2755 0.551 0.1735
0.1939 0.5306 0.2755 0.0
0.1837 0.0 0.0 0.8163
0.0 0.0 1.0 0.0
0.1735 0.3673 0.0 0.4592
0.0 0.5204 0.4796 0.0
0.2526 0.5281 0.0689 0.1505
|
| PWM uniform | A C G T
-0.1424 0.5287 -0.5644 -0.1424
0.4786 -1.6758 0.3469 -0.2429
-0.2429 -0.656 0.9201 -1.6758
-1.6758 -0.2429 1.0443 -1.6758
0.6991 -1.6758 0.4786 -1.6758
0.9201 -0.656 -0.2429 -1.6758
1.1336 -1.6758 -1.6758 -0.656
0.0486 0.3232 -0.2861 -0.2015
0.3232 -0.2861 -0.722 0.3232
-0.722 0.2989 0.4989 -0.656
0.5189 0.0797 -0.722 -0.2861
0.8083 -0.2015 -0.2861 -1.6758
-0.656 1.1336 -1.6758 -1.6758
1.0443 -1.6758 -1.6758 -0.2429
-1.6758 0.0797 0.6825 -0.2861
-0.2015 0.6483 0.0797 -1.6758
-0.2429 -1.6758 -1.6758 1.0443
-1.6758 -1.6758 1.235 -1.6758
-0.2861 0.3232 -1.6758 0.5189
-1.6758 0.6308 0.5576 -1.6758
0.0083 0.644 -0.8889 -0.3908
|
| PWM hg19 | A C G T
-0.2616 0.6931 -0.438 -0.2616
0.3431 -1.6758 0.5076 -0.3584
-0.3584 -0.5352 1.0906 -1.6758
-1.6758 -0.1006 1.2162 -1.6758
0.5599 -1.6758 0.642 -1.6758
0.7778 -0.5352 -0.1006 -1.6758
0.9889 -1.6758 -1.6758 -0.7521
-0.0767 0.4833 -0.1457 -0.3186
0.1909 -0.1457 -0.6056 0.1909
-0.8143 0.4584 0.6628 -0.7521
0.3827 0.2334 -0.6056 -0.4
0.6675 -0.0575 -0.1457 -1.6758
-0.7521 1.3065 -1.6758 -1.6758
0.9006 -1.6758 -1.6758 -0.3584
-1.6758 0.2334 0.8495 -0.4
-0.3186 0.8149 0.2334 -1.6758
-0.3584 -1.6758 -1.6758 0.9006
-1.6758 -1.6758 1.4089 -1.6758
-0.4 0.4833 -1.6758 0.3827
-1.6758 0.7971 0.7226 -1.6758
-0.1158 0.8105 -0.7851 -0.5002
|
