back NR2C2_f1 HOCOMOCO-build9-MAR2012


UniProt NR2C2
motif weight2058.0
total sequences2060
data sources TRANSFAC20112:59
YALECHIPSEQV3:2001
motif logo
consensusRRSbSARAGGKMR
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
  986.3903   173.5656   797.8012   100.2429 
  408.3861    88.3701  1413.8888    147.355 
  200.3049   246.3718  1441.7901   169.5332 
  208.8459    213.688   460.5669  1174.8992 
  253.6912  1324.4288   334.9013   144.9787 
 1669.8176   104.6887   264.6807    18.8131 
 1168.8116   121.6643    742.502     25.022 
 1764.4794      8.364   218.6522    66.5044 
   99.2922    27.1168  1828.7588   102.8323 
   62.1053    83.4269  1675.8946   236.5733 
  127.5395   219.9865   442.5603  1267.9137 
  290.4631  1481.2835   206.8144     79.439 
 1631.0633    66.8645   251.8315   108.2407 
PPM
     A          C          G          T    
    0.4793     0.0843     0.3877     0.0487 
    0.1984     0.0429      0.687     0.0716 
    0.0973     0.1197     0.7006     0.0824 
    0.1015     0.1038     0.2238     0.5709 
    0.1233     0.6436     0.1627     0.0704 
    0.8114     0.0509     0.1286     0.0091 
    0.5679     0.0591     0.3608     0.0122 
    0.8574     0.0041     0.1062     0.0323 
    0.0482     0.0132     0.8886       0.05 
    0.0302     0.0405     0.8143      0.115 
     0.062     0.1069      0.215     0.6161 
    0.1411     0.7198     0.1005     0.0386 
    0.7925     0.0325     0.1224     0.0526 
PWM uniform
     A          C          G          T    
    0.6491    -1.0794     0.4374    -1.6205 
     -0.23     -1.744     1.0086    -1.2412 
   -0.9376    -0.7323     1.0281    -1.1027 
   -0.8962    -0.8735    -0.1103     0.8237 
   -0.7033     0.9433    -0.4274    -1.2572 
    1.1747    -1.5778    -0.6612    -3.2158 
    0.8185    -1.4301     0.3657    -2.9537 
    1.2298    -3.9175    -0.8507    -2.0214 
   -1.6298    -2.8788     1.2655    -1.5954 
   -2.0878    -1.8003     1.1783    -0.7726 
   -1.3836    -0.8447      -0.15     0.8997 
   -0.5689     1.0551    -0.9059    -1.8482 
    1.1513    -2.0161    -0.7106    -1.5451 
PWM hg19
     A          C          G          T    
    0.4948    -0.8982       0.62     -1.772 
   -0.3839    -1.5645     1.1914    -1.3937 
   -1.0907    -0.5506     1.2109    -1.2555 
   -1.0494    -0.6919      0.072     0.6693 
   -0.8567     1.1261    -0.2453    -1.4097 
    1.0202    -1.3978    -0.4794    -3.3552 
    0.6641    -1.2496     0.5483    -3.0966 
    1.0753     -3.766    -0.6691    -2.1714 
   -1.7813    -2.7068     1.4484     -1.747 
   -2.2375     -1.621     1.3612    -0.9259 
   -1.5358    -0.6631     0.0323     0.7453 
   -0.7224     1.2379    -0.7244    -1.9989 
    0.9968    -1.8377    -0.5288    -1.6968