back NR1I2_f2 HOCOMOCO-build9-MAR2012


UniProt NR1I2
motif weight29.1831
total sequences50
data sources TRANSFAC20112:50
motif logo
consensusddRRSTYARnnRAGKTCAb
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
    9.3803     3.6479     5.6282    10.5268 
    8.7549     1.8761    11.6732     6.8789 
   12.6113     3.9606     11.569     1.0423 
    7.7127        0.0    19.3859     2.0845 
    1.9803     5.9408    16.3634     4.8986 
       0.0      0.938     1.8761     26.369 
       0.0    17.7183     1.8761     9.5887 
   20.6366     8.5465        0.0        0.0 
   17.5099     2.8141     4.7944     4.0648 
    8.7549     6.0451     8.5465     5.8366 
     9.693     6.8789     6.7746     5.8366 
   17.4056     1.9803     9.7972        0.0 
   27.0986        0.0     2.0845        0.0 
       0.0        0.0    29.1831        0.0 
       0.0     2.0845     8.8592    18.2394 
    2.8141     1.8761     1.0423    23.4507 
       0.0       22.2     3.9606     3.0225 
   26.2648      0.938     1.9803        0.0 
    3.8042     6.6183    10.3704     8.3901 
PPM
     A          C          G          T    
    0.3214      0.125     0.1929     0.3607 
       0.3     0.0643        0.4     0.2357 
    0.4321     0.1357     0.3964     0.0357 
    0.2643        0.0     0.6643     0.0714 
    0.0679     0.2036     0.5607     0.1679 
       0.0     0.0321     0.0643     0.9036 
       0.0     0.6071     0.0643     0.3286 
    0.7071     0.2929        0.0        0.0 
       0.6     0.0964     0.1643     0.1393 
       0.3     0.2071     0.2929        0.2 
    0.3321     0.2357     0.2321        0.2 
    0.5964     0.0679     0.3357        0.0 
    0.9286        0.0     0.0714        0.0 
       0.0        0.0        1.0        0.0 
       0.0     0.0714     0.3036      0.625 
    0.0964     0.0643     0.0357     0.8036 
       0.0     0.7607     0.1357     0.1036 
       0.9     0.0321     0.0679        0.0 
    0.1304     0.2268     0.3554     0.2875 
PWM uniform
     A          C          G          T    
     0.228    -0.5945    -0.2293     0.3343 
    0.1649    -1.0963     0.4304    -0.0526 
    0.5026    -0.5272      0.422    -1.4624 
      0.05     -2.267     0.9104    -1.0224 
   -1.0586    -0.1821     0.7486    -0.3489 
    -2.267    -1.5193    -1.0963      1.207 
    -2.267     0.8244    -1.0963     0.2482 
    0.9704     0.1429     -2.267     -2.267 
    0.8131    -0.7999    -0.3672    -0.5058 
    0.1649    -0.1668     0.1429    -0.1976 
    0.2581    -0.0526    -0.0662    -0.1976 
    0.8074    -1.0586      0.268     -2.267 
    1.2334     -2.267    -1.0224     -2.267 
    -2.267     -2.267     1.3054     -2.267 
    -2.267    -1.0224     0.1757     0.8521 
   -0.7999    -1.0963    -1.4624     1.0935 
    -2.267     1.0407    -0.5272    -0.7445 
    1.2031    -1.5193    -1.0586     -2.267 
   -0.5603    -0.0869     0.3205     0.1262 
PWM hg19
     A          C          G          T    
    0.0871    -0.4434    -0.0683      0.192 
    0.0248    -0.9665     0.6021    -0.1891 
    0.3584     -0.374     0.5936    -1.5449 
   -0.0884     -2.267     1.0865      -1.13 
   -1.1646    -0.0201     0.9234    -0.4793 
    -2.267    -1.4187    -0.9665     1.0575 
    -2.267     0.9998    -0.9665      0.107 
    0.8223     0.3108     -2.267     -2.267 
    0.6661    -0.6562    -0.2095    -0.6321 
    0.0248    -0.0045     0.3108    -0.3313 
    0.1168      0.112     0.0982    -0.3313 
    0.6605    -0.9269     0.4377     -2.267 
    1.0838     -2.267    -0.8887     -2.267 
    -2.267     -2.267     1.4837     -2.267 
    -2.267    -0.8887     0.3441     0.7048 
   -0.9167    -0.9665    -1.3571     0.9447 
    -2.267     1.2176     -0.374    -0.8633 
    1.0537    -1.4187    -0.9269     -2.267 
   -0.6851      0.077     0.4908    -0.0133