back NKX28_f1 HOCOMOCO-build9-MAR2012


UniProt NKX28
motif weight6.0
total sequences6
data sources TRANSFAC20112:6
motif logo
consensusbTCAAGGAb
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
    0.1471     1.2059     1.2059     3.4412 
       0.0        0.0        0.0        6.0 
       0.0     4.6471     1.3529        0.0 
    5.7059        0.0     0.2941        0.0 
       6.0        0.0        0.0        0.0 
       0.0        0.0        6.0        0.0 
       0.0        0.0     3.5882     2.4118 
    3.5882        0.0     2.4118        0.0 
    0.1471     3.4412     1.2059     1.2059 
PPM
     A          C          G          T    
    0.0245      0.201      0.201     0.5735 
       0.0        0.0        0.0        1.0 
       0.0     0.7745     0.2255        0.0 
     0.951        0.0      0.049        0.0 
       1.0        0.0        0.0        0.0 
       0.0        0.0        1.0        0.0 
       0.0        0.0      0.598      0.402 
     0.598        0.0      0.402        0.0 
    0.0245     0.5735      0.201      0.201 
PWM uniform
     A          C          G          T    
    -1.186    -0.1637    -0.1637     0.6914 
   -1.4699    -1.4699    -1.4699      1.197 
   -1.4699     0.9615    -0.0785    -1.4699 
    1.1503    -1.4699    -0.9651    -1.4699 
     1.197    -1.4699    -1.4699    -1.4699 
   -1.4699    -1.4699      1.197    -1.4699 
   -1.4699    -1.4699     0.7285     0.3839 
    0.7285    -1.4699     0.3839    -1.4699 
    -1.186     0.6914    -0.1637    -0.1637 
PWM hg19
     A          C          G          T    
    -1.222     -0.027     -0.027     0.5558 
   -1.4699    -1.4699    -1.4699     1.0539 
   -1.4699     1.1297      0.062    -1.4699 
    1.0077    -1.4699    -0.8885    -1.4699 
    1.0539    -1.4699    -1.4699    -1.4699 
   -1.4699    -1.4699     1.3683    -1.4699 
   -1.4699    -1.4699     0.8928     0.2551 
    0.5923    -1.4699     0.5404    -1.4699 
    -1.222      0.855     -0.027     -0.274