| UniProt |
NKX22
|
| motif weight | 24.4878 |
| total sequences | 28 |
| data sources |
TRANSFAC20112:28
|
| motif logo |
|
| consensus | bWYAAGTRbTTd |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
2.4146 2.8537 7.5854 11.6341
5.7073 0.0 1.6585 17.122
0.0 7.9024 2.5366 14.0488
24.4878 0.0 0.0 0.0
24.4878 0.0 0.0 0.0
0.0 0.0 24.4878 0.0
0.878 0.0 0.0 23.6098
8.7805 0.878 14.8293 0.0
0.439 8.3415 10.5366 5.1707
2.6341 0.878 1.3171 19.6585
2.1951 0.0 1.7561 20.5366
6.5854 3.0732 6.0488 8.7805
|
| PPM | A C G T
0.0986 0.1165 0.3098 0.4751
0.2331 0.0 0.0677 0.6992
0.0 0.3227 0.1036 0.5737
1.0 0.0 0.0 0.0
1.0 0.0 0.0 0.0
0.0 0.0 1.0 0.0
0.0359 0.0 0.0 0.9641
0.3586 0.0359 0.6056 0.0
0.0179 0.3406 0.4303 0.2112
0.1076 0.0359 0.0538 0.8028
0.0896 0.0 0.0717 0.8386
0.2689 0.1255 0.247 0.3586
|
| PWM uniform | A C G T
-0.7671 -0.639 0.1918 0.5858
-0.0618 -2.1583 -1.0353 0.9514
-2.1583 0.2289 -0.7298 0.7633
1.2957 -2.1583 -2.1583 -2.1583
1.2957 -2.1583 -2.1583 -2.1583
-2.1583 -2.1583 1.2957 -2.1583
-1.4173 -2.1583 -2.1583 1.2603
0.325 -1.4173 0.8145 -2.1583
-1.7207 0.2781 0.4934 -0.1478
-0.701 -1.4173 -1.1848 1.0837
-0.8378 -2.1583 -0.9963 1.1258
0.0648 -0.5807 -0.0106 0.325
|
| PWM hg19 | A C G T
-0.881 -0.4933 0.3588 0.4418
-0.1961 -2.1583 -0.9082 0.8041
-2.1583 0.3965 -0.5877 0.6176
1.1463 -2.1583 -2.1583 -2.1583
1.1463 -2.1583 -2.1583 -2.1583
-2.1583 -2.1583 1.4734 -2.1583
-1.4952 -2.1583 -2.1583 1.1111
0.1843 -1.3173 0.9889 -2.1583
-1.7728 0.4464 0.6645 -0.2803
-0.8174 -1.3173 -1.067 0.9356
-0.9488 -2.1583 -0.867 0.9774
-0.0719 -0.4328 0.1527 0.1843
|
