| UniProt |
NDF1
|
| motif weight | 25.88235 |
| total sequences | 28 |
| data sources |
TRANSFAC20112:28
|
| motif logo |
|
| consensus | bRRCAGRTGdbM |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
4.1176 11.1765 5.4118 5.1765
7.4118 1.1765 17.2941 0.0
7.1765 3.2941 15.4118 0.0
0.0 25.8824 0.0 0.0
24.0 0.0 0.0 1.8824
1.1765 3.7647 20.9412 0.0
11.1765 4.8235 9.8824 0.0
0.0 0.9412 0.0 24.9412
0.0 0.0 25.8824 0.0
3.0588 1.8824 13.4118 7.5294
2.0 12.3529 6.2353 5.2941
6.0294 14.2647 5.3235 0.2647
|
| PPM | A C G T
0.1591 0.4318 0.2091 0.2
0.2864 0.0455 0.6682 0.0
0.2773 0.1273 0.5955 0.0
0.0 1.0 0.0 0.0
0.9273 0.0 0.0 0.0727
0.0455 0.1455 0.8091 0.0
0.4318 0.1864 0.3818 0.0
0.0 0.0364 0.0 0.9636
0.0 0.0 1.0 0.0
0.1182 0.0727 0.5182 0.2909
0.0773 0.4773 0.2409 0.2045
0.233 0.5511 0.2057 0.0102
|
| PWM uniform | A C G T
-0.3901 0.4984 -0.1571 -0.1956
0.1215 -1.2976 0.9106 -2.1922
0.0925 -0.5729 0.8009 -2.1922
-2.1922 1.2988 -2.1922 -2.1922
1.2257 -2.1922 -2.1922 -0.994
-1.2976 -0.4644 1.0941 -2.1922
0.4984 -0.2563 0.3842 -2.1922
-2.1922 -1.4235 -2.1922 1.2629
-2.1922 -2.1922 1.2988 -2.1922
-0.6319 -0.994 0.6693 0.1357
-0.9513 0.592 -0.0328 -0.1762
-0.0625 0.7276 -0.1714 -1.9105
|
| PWM hg19 | A C G T
-0.5176 0.67 0.0039 -0.3278
-0.0167 -1.1854 1.0861 -2.1922
-0.0453 -0.4235 0.9755 -2.1922
-2.1922 1.4768 -2.1922 -2.1922
1.0765 -2.1922 -2.1922 -1.0994
-1.3861 -0.3115 1.2709 -2.1922
0.355 -0.0977 0.5544 -2.1922
-2.1922 -1.3211 -2.1922 1.1135
-2.1922 -2.1922 1.4768 -2.1922
-0.752 -0.8628 0.8428 -0.0028
-1.0587 0.7646 0.1307 -0.3088
-0.1975 0.9015 -0.0107 -1.9463
|
