back ITF2_f1 HOCOMOCO-build9-MAR2012


UniProt ITF2
motif weight453.52026
total sequences756
data sources PARALLELSELEX:735
TRANSFAC20112:21
motif logo
consensusvCAGGTGYd
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
  150.5873    155.415   146.9918     0.5262 
       0.0   453.5203        0.0        0.0 
  453.5203        0.0        0.0        0.0 
       0.0        0.0   453.5203        0.0 
       0.0        0.0   453.5203        0.0 
       0.0        0.0     0.5262   452.9941 
       0.0        0.0   453.5203        0.0 
   11.3017   299.0284        0.0   143.1902 
  169.1435    36.4549   157.2535    90.6684 
PPM
     A          C          G          T    
     0.332     0.3427     0.3241     0.0012 
       0.0        1.0        0.0        0.0 
       1.0        0.0        0.0        0.0 
       0.0        0.0        1.0        0.0 
       0.0        0.0        1.0        0.0 
       0.0        0.0     0.0012     0.9988 
       0.0        0.0        1.0        0.0 
    0.0249     0.6593        0.0     0.3157 
     0.373     0.0804     0.3467     0.1999 
PWM uniform
     A          C          G          T    
    0.2805     0.3117     0.2566    -4.0237 
   -4.3194     1.3763    -4.3194    -4.3194 
    1.3763    -4.3194    -4.3194    -4.3194 
   -4.3194    -4.3194     1.3763    -4.3194 
   -4.3194    -4.3194     1.3763    -4.3194 
   -4.3194    -4.3194    -4.0237     1.3751 
   -4.3194    -4.3194     1.3763    -4.3194 
   -2.1923     0.9615    -4.3194     0.2307 
    0.3956     -1.107     0.3234    -0.2202 
PWM hg19
     A          C          G          T    
    0.1275     0.4932     0.4379     -4.061 
   -4.3194     1.5587    -4.3194    -4.3194 
    1.2222    -4.3194    -4.3194    -4.3194 
   -4.3194    -4.3194     1.5587    -4.3194 
   -4.3194    -4.3194     1.5587    -4.3194 
   -4.3194    -4.3194    -3.9735      1.221 
   -4.3194    -4.3194     1.5587    -4.3194 
   -2.3272     1.1437    -4.3194     0.0778 
    0.2424    -0.9307     0.5048    -0.3721