back HXA9_f1 HOCOMOCO-build9-MAR2012


UniProt HXA9
motif weight29.0
total sequences29
data sources TRANSFAC20112:29
motif logo
consensusTGACASKTTWAYRR
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
    0.2435     0.2435     0.2435    28.2696 
    0.9739        0.0    28.0261        0.0 
   25.9701     1.0821     0.9739     0.9739 
     2.056    26.2948        0.0     0.6493 
   24.4552     3.5709     0.9739        0.0 
    0.6493     3.8955    21.4254     3.0299 
    1.9478     3.8955     6.8172    16.3396 
       0.0        0.0     0.9739    28.0261 
    0.9739     0.9739     0.9739    26.0784 
   10.4963        0.0     1.9478     16.556 
   23.0485     1.9478        0.0     4.0037 
    1.9478    11.6866     0.9739    14.3918 
    5.9515        0.0    17.5299     5.5187 
   15.6903     2.9216    10.3881        0.0 
PPM
     A          C          G          T    
    0.0084     0.0084     0.0084     0.9748 
    0.0336        0.0     0.9664        0.0 
    0.8955     0.0373     0.0336     0.0336 
    0.0709     0.9067        0.0     0.0224 
    0.8433     0.1231     0.0336        0.0 
    0.0224     0.1343     0.7388     0.1045 
    0.0672     0.1343     0.2351     0.5634 
       0.0        0.0     0.0336     0.9664 
    0.0336     0.0336     0.0336     0.8993 
    0.3619        0.0     0.0672     0.5709 
    0.7948     0.0672        0.0     0.1381 
    0.0672      0.403     0.0336     0.4963 
    0.2052        0.0     0.6045     0.1903 
     0.541     0.1007     0.3582        0.0 
PWM uniform
     A          C          G          T    
    -2.009     -2.009     -2.009     1.2803 
   -1.4944     -2.263     1.2719     -2.263 
     1.198    -1.4365    -1.4944    -1.4944 
   -1.0269       1.21     -2.263    -1.6914 
    1.1398    -0.6064    -1.4944     -2.263 
   -1.6914    -0.5354     1.0123    -0.7372 
    -1.065    -0.5354     -0.055      0.753 
    -2.263     -2.263    -1.4944     1.2719 
   -1.4944    -1.4944    -1.4944      1.202 
    0.3373     -2.263     -1.065     0.7655 
    1.0826     -1.065     -2.263    -0.5128 
    -1.065     0.4371    -1.4944     0.6327 
   -0.1749     -2.263       0.82    -0.2408 
    0.7145    -0.7655     0.3277     -2.263 
PWM hg19
     A          C          G          T    
   -2.0417    -1.9649    -1.9649     1.1304 
   -1.5744     -2.263       1.45     -2.263 
    1.0486    -1.3295    -1.3921    -1.5744 
   -1.1341     1.3879     -2.263    -1.7558 
    0.9907    -0.4558    -1.3921     -2.263 
   -1.7558    -0.3825      1.189    -0.8561 
   -1.1704    -0.3825     0.1095     0.6065 
    -2.263     -2.263    -1.3921     1.1221 
   -1.5744    -1.3921    -1.3921     1.0526 
     0.195     -2.263    -0.9337     0.6189 
    0.9338    -0.9337     -2.263    -0.6388 
   -1.1704     0.6089    -1.3921     0.4872 
   -0.3091     -2.263     0.9953    -0.3735 
    0.5683    -0.6206     0.4981     -2.263