back HLF_si HOCOMOCO-build9-MAR2012


UniProt HLF
motif weight34.95303
total sequences42
data sources JASPAR:18
TRANSFAC20112:24
motif logo
consensusnRTKRYGTAAYvn
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
    7.0822      5.703    15.0856     7.0822 
   18.8557       2.99    10.1174       2.99 
       0.0        0.0        0.0     34.953 
    0.6443     2.0235     6.0705    26.2148 
   18.7651     2.0235    14.1644        0.0 
       0.0    16.1879     2.6678    16.0973 
    2.0235        0.0    32.9295        0.0 
       0.0     6.0705        0.0    28.8826 
    34.953        0.0        0.0        0.0 
   33.9866        0.0        0.0     0.9665 
    0.9665    19.8222        0.0    14.1644 
   14.1644    13.7517      4.047       2.99 
    4.2886    13.0268     13.349     4.2886 
PPM
     A          C          G          T    
    0.2026     0.1632     0.4316     0.2026 
    0.5395     0.0855     0.2895     0.0855 
       0.0        0.0        0.0        1.0 
    0.0184     0.0579     0.1737       0.75 
    0.5369     0.0579     0.4052        0.0 
       0.0     0.4631     0.0763     0.4605 
    0.0579        0.0     0.9421        0.0 
       0.0     0.1737        0.0     0.8263 
       1.0        0.0        0.0        0.0 
    0.9723        0.0        0.0     0.0277 
    0.0277     0.5671        0.0     0.4052 
    0.4052     0.3934     0.1158     0.0855 
    0.1227     0.3727     0.3819     0.1227 
PWM uniform
     A          C          G          T    
   -0.1888    -0.3788     0.5064    -0.1888 
    0.7183    -0.9091     0.1339    -0.9091 
   -2.3828    -2.3828    -2.3828     1.3146 
   -1.8374    -1.1957    -0.3245     1.0351 
    0.7137    -1.1957      0.447    -2.3828 
   -2.3828     0.5732    -0.9958     0.5678 
   -1.1957    -2.3828     1.2564    -2.3828 
   -2.3828    -0.3245    -2.3828      1.129 
    1.3146    -2.3828    -2.3828    -2.3828 
    1.2872    -2.3828    -2.3828    -1.6467 
   -1.6467     0.7661    -2.3828      0.447 
     0.447     0.4192    -0.6681    -0.9091 
   -0.6203     0.3684     0.3913    -0.6203 
PWM hg19
     A          C          G          T    
    -0.325    -0.2185     0.6801     -0.325 
    0.5712    -0.7651     0.3033    -1.0262 
   -2.3828    -2.3828    -2.3828      1.164 
   -1.8996    -1.0651    -0.1631     0.8859 
    0.5666    -1.0651     0.6201    -2.3828 
   -2.3828     0.7474    -0.8555     0.4219 
   -1.3006    -2.3828     1.4351    -2.3828 
   -2.3828    -0.1631    -2.3828     0.9793 
     1.164    -2.3828    -2.3828    -2.3828 
    1.1368    -2.3828    -2.3828    -1.7243 
   -1.7243     0.9419    -2.3828     0.3022 
    0.3022     0.5921    -0.5156    -1.0262 
   -0.7467     0.5407     0.5639    -0.7467