back GCR_si HOCOMOCO-build9-MAR2012


UniProt GCR
motif weight4225.99495
total sequences4268
data sources HUDSONALPHACHIPSEQV2:2000
JASPAR:9
TRANSFAC20112:142
YALECHIPSEQV3:2117
motif logo
consensusRGRACAd
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
 2883.2798     8.3888  1252.2744     82.052 
  122.4616    11.9674  4054.4072    37.1588 
 3013.5305   160.3089   783.7866    268.369 
 3942.0551     25.516    177.455    80.9689 
  124.4754  3567.2248   525.6078     8.6871 
 3932.4745    45.9432   198.8598    48.7175 
   692.157   333.1799  2082.0878  1118.5703
PPM
     A          C          G          T    
    0.6823      0.002     0.2963     0.0194 
     0.029     0.0028     0.9594     0.0088 
    0.7131     0.0379     0.1855     0.0635 
    0.9328      0.006      0.042     0.0192 
    0.0295     0.8441     0.1244     0.0021 
    0.9305     0.0109     0.0471     0.0115 
    0.1638     0.0788     0.4927     0.2647
PWM uniform
     A          C          G          T    
    1.0027    -4.6156     0.1697    -2.5322 
     -2.14    -4.3217     1.3434    -3.2948 
    1.0469    -1.8747    -0.2979    -1.3646 
    1.3153    -3.6468    -1.7743    -2.5452 
    -2.124     1.2154    -0.6962    -4.5875 
    1.3129    -3.0929    -1.6616    -3.0367 
   -0.4219    -1.1498     0.6774      0.057
PWM hg19
     A          C          G          T    
    0.8482    -4.4665     0.3525    -2.6827 
   -2.2919    -4.1639     1.5263    -3.4406 
    0.8923    -1.6938    -0.1153    -1.5179 
    1.1607    -3.4764    -1.5932    -2.6956 
   -2.2759     1.3984    -0.5138    -4.7103 
    1.1583    -2.9171    -1.4804    -3.1845 
    -0.576    -0.9678     0.8603    -0.0974