back GATA5_f1 HOCOMOCO-build9-MAR2012


UniProt GATA5
motif weight13.0
total sequences13
data sources TRANSFAC20112:13
motif logo
consensusWvMnWGATAWbnhdRhd
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
    4.0345     1.0086     1.1207     6.8362 
    5.1552     3.8103     3.0259     1.0086 
    9.1897     1.7931     1.0086     1.0086 
    3.9224     2.1293     4.1466     2.8017 
    6.8362        0.0     2.1293     4.0345 
       0.0        0.0       13.0        0.0 
      13.0        0.0        0.0        0.0 
       0.0        0.0        0.0       13.0 
    8.9655        0.0        0.0     4.0345 
    8.9655        0.0     1.9052     2.1293 
    1.0086     5.9397     2.9138     3.1379 
    2.0172     2.8017     2.0172     6.1638 
    2.0172     3.8103     1.9052     5.2672 
    5.7155     1.0086     4.0345     2.2414 
    5.0431        0.0     6.9483     1.0086 
    5.1552     4.0345     1.0086     2.8017 
    2.5216     1.5129     3.5302     5.4353 
PPM
     A          C          G          T    
    0.3103     0.0776     0.0862     0.5259 
    0.3966     0.2931     0.2328     0.0776 
    0.7069     0.1379     0.0776     0.0776 
    0.3017     0.1638      0.319     0.2155 
    0.5259        0.0     0.1638     0.3103 
       0.0        0.0        1.0        0.0 
       1.0        0.0        0.0        0.0 
       0.0        0.0        0.0        1.0 
    0.6897        0.0        0.0     0.3103 
    0.6897        0.0     0.1466     0.1638 
    0.0776     0.4569     0.2241     0.2414 
    0.1552     0.2155     0.1552     0.4741 
    0.1552     0.2931     0.1466     0.4052 
    0.4397     0.0776     0.3103     0.1724 
    0.3879        0.0     0.5345     0.0776 
    0.3966     0.3103     0.0776     0.2155 
     0.194     0.1164     0.2716     0.4181 
PWM uniform
     A          C          G          T    
    0.1837     -0.858    -0.7923     0.6532 
    0.3985     0.1345    -0.0593     -0.858 
    0.9268    -0.4691     -0.858     -0.858 
    0.1594    -0.3397     0.2073    -0.1224 
    0.6532    -1.8031    -0.3397     0.1837 
   -1.8031    -1.8031     1.2544    -1.8031 
    1.2544    -1.8031    -1.8031    -1.8031 
   -1.8031    -1.8031    -1.8031     1.2544 
    0.9037    -1.8031    -1.8031     0.1837 
    0.9037    -1.8031     -0.424    -0.3397 
    -0.858     0.5254    -0.0904    -0.0292 
    -0.381    -0.1224     -0.381     0.5589 
    -0.381     0.1345     -0.424     0.4177 
    0.4908     -0.858     0.1837       -0.3 
     0.379    -1.8031      0.668     -0.858 
    0.3985     0.1837     -0.858    -0.1224 
   -0.2073    -0.5913     0.0695     0.4457 
PWM hg19
     A          C          G          T    
    0.0517    -0.7422    -0.6721     0.5127 
    0.2622     0.2932      0.094    -0.9497 
     0.783    -0.3311    -0.7422    -0.9497 
     0.028    -0.1961     0.3677    -0.2464 
    0.5127    -1.8031    -0.1961     0.0517 
   -1.8031    -1.8031     1.4295    -1.8031 
    1.1075    -1.8031    -1.8031    -1.8031 
   -1.8031    -1.8031    -1.8031     1.1075 
    0.7602    -1.8031    -1.8031     0.0517 
    0.7602    -1.8031     -0.284    -0.4564 
   -0.9497      0.692      0.062    -0.1559 
   -0.4961      0.029    -0.2391     0.4199 
   -0.4961     0.2932     -0.284      0.281 
    0.3529    -0.7422     0.3435    -0.4182 
     0.243    -1.8031     0.8368    -0.9497 
    0.2622     0.3435    -0.7422    -0.2464 
   -0.3286    -0.4594     0.2265     0.3086