back CTCF_f2 HOCOMOCO-build9-MAR2012


UniProt CTCF
motif weight2861.30794
total sequences2990
data sources HUDSONALPHACHIPSEQV2:2000
JASPAR:913
TRANSFAC20112:77
motif logo
consensusbddCCRSbAGRKGGCRShv
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
  280.5564   890.0926   420.4217  1270.2372 
  464.4797   464.4744  1268.3184   664.0355 
  687.9014   231.0498  1529.2976   413.0591 
  170.7052  2433.9465   115.1601   141.4961 
   23.5312  2748.7919    34.5843    54.4006 
 1923.8531    92.7429     537.74    306.972 
  115.8074  1677.9044  1024.6909    42.9053 
  354.7811  1303.7857    385.162   817.5791 
 2387.2992   177.0913   143.1511   153.7664 
    8.1227    11.0723  2802.1589     39.954 
  967.0799    16.4597  1866.2867    11.4816 
  157.8771   107.6865   1625.552   970.1924 
   38.6914     0.5948  2787.9773    34.0445 
  118.1712    62.7868  2511.8251   168.5248 
  296.4752  2357.2406    41.0391    166.553 
 1290.0135    41.5171  1475.3327    54.4446 
  178.4356  1445.8639  1130.0211   106.9873 
  399.2443  1002.3805   311.6378  1148.0454 
 1132.0681   693.1418   889.0964   147.0016 
PPM
     A          C          G          T    
    0.0981     0.3111     0.1469     0.4439 
    0.1623     0.1623     0.4433     0.2321 
    0.2404     0.0807     0.5345     0.1444 
    0.0597     0.8506     0.0402     0.0495 
    0.0082     0.9607     0.0121      0.019 
    0.6724     0.0324     0.1879     0.1073 
    0.0405     0.5864     0.3581      0.015 
     0.124     0.4557     0.1346     0.2857 
    0.8343     0.0619       0.05     0.0537 
    0.0028     0.0039     0.9793      0.014 
     0.338     0.0058     0.6522      0.004 
    0.0552     0.0376     0.5681     0.3391 
    0.0135     0.0002     0.9744     0.0119 
    0.0413     0.0219     0.8779     0.0589 
    0.1036     0.8238     0.0143     0.0582 
    0.4508     0.0145     0.5156      0.019 
    0.0624     0.5053     0.3949     0.0374 
    0.1395     0.3503     0.1089     0.4012 
    0.3956     0.2422     0.3107     0.0514 
PWM uniform
     A          C          G          T    
   -0.9317      0.218    -0.5295      0.573 
   -0.4303    -0.4303     0.5715    -0.0742 
    -0.039    -1.1243     0.7583    -0.5471 
    -1.424     1.2226    -1.8121    -1.6093 
    -3.336     1.3441    -2.9762    -2.5432 
    0.9876    -2.0245    -0.2844    -0.8423 
   -1.8066      0.851     0.3586    -2.7712 
   -0.6984      0.599    -0.6167     0.1333 
    1.2032    -1.3877    -1.5978    -1.5272 
   -4.2617    -4.0058     1.3633    -2.8392 
    0.3008    -3.6605     0.9573     -3.975 
   -1.5012     -1.878     0.8193      0.304 
   -2.8698     -5.626     1.3583     -2.991 
   -1.7867    -2.4046      1.254    -1.4367 
   -0.8769     1.1906    -2.8136    -1.4483 
    0.5884    -2.8026     0.7225    -2.5424 
   -1.3802     0.7023     0.4562    -1.8844 
    -0.581     0.3366    -0.8273      0.472 
     0.458    -0.0314     0.2169    -1.5716 
PWM hg19
     A          C          G          T    
   -1.0852     0.4007    -0.3473     0.4186 
   -0.5843     -0.248     0.7543    -0.2284 
   -0.1932    -0.9427     0.9412     -0.701 
   -1.5767     1.4055    -1.6319    -1.7616 
   -3.4777      1.527    -2.8023     -2.692 
    0.8331    -1.8449     -0.102    -0.9959 
   -1.9584     1.0338     0.5413    -2.9185 
   -0.8522     0.7818    -0.4345     -0.021 
    1.0487    -1.2065    -1.4171    -1.6798 
    -4.384    -3.8486     1.5463    -2.9859 
    0.1465    -3.4956     1.1401    -4.1052 
   -1.6538     -1.698     1.0021     0.1497 
   -3.0163    -5.5808     1.5412    -3.1365 
   -1.9386    -2.2267     1.4369    -1.5894 
   -1.0304     1.3735    -2.6384     -1.601 
     0.434    -2.6272     0.9053    -2.6912 
    -1.533     0.8851      0.639     -2.036 
   -0.7348     0.5193    -0.6453     0.3177 
    0.3037     0.1511     0.3996    -1.7241