back COT2_f2 HOCOMOCO-build9-MAR2012


UniProt COT2
motif weight78.94358
total sequences81
data sources TRANSFAC20112:81
motif logo
consensusvRGKbCAdRGRKYvv
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
   32.0173    16.8798    23.1061     6.9404 
   43.8702      0.914    20.9069    13.2525 
    7.1975     2.1707    62.6065      6.969 
    5.0268     1.0282    56.0374    16.8512 
     7.426     9.8251    16.4513    45.2412 
       0.0    72.2031     4.5698     2.1707 
   71.7461     4.1128        0.0     3.0846 
   42.9563      7.426    20.5642     7.9972 
   43.2419     3.0846    21.9922    10.6248 
   14.3949        0.0    59.2934     5.2553 
   11.5388     5.3695    51.7532    10.2821 
     7.226     8.7683    16.7084    46.2408 
     5.141    48.6685     9.3681    15.7659 
   45.8124    10.5106    15.7659     6.8547 
   33.4739    18.7362    14.8519    11.8815 
PPM
     A          C          G          T    
    0.4056     0.2138     0.2927     0.0879 
    0.5557     0.0116     0.2648     0.1679 
    0.0912     0.0275     0.7931     0.0883 
    0.0637      0.013     0.7098     0.2135 
    0.0941     0.1245     0.2084     0.5731 
       0.0     0.9146     0.0579     0.0275 
    0.9088     0.0521        0.0     0.0391 
    0.5441     0.0941     0.2605     0.1013 
    0.5478     0.0391     0.2786     0.1346 
    0.1823        0.0     0.7511     0.0666 
    0.1462      0.068     0.6556     0.1302 
    0.0915     0.1111     0.2116     0.5857 
    0.0651     0.6165     0.1187     0.1997 
    0.5803     0.1331     0.1997     0.0868 
     0.424     0.2373     0.1881     0.1505 
PWM uniform
     A          C          G          T    
    0.4635    -0.1475       0.15    -0.9528 
    0.7695    -2.3401     0.0547    -0.3729 
   -0.9213    -1.8537     1.1179    -0.9492 
   -1.2249    -2.2847      1.009    -0.1491 
   -0.8941     -0.646    -0.1716     0.7996 
   -2.9481     1.2582    -1.3025    -1.8537 
    1.2519    -1.3867    -2.9481    -1.6068 
     0.749    -0.8941      0.039    -0.8292 
    0.7555    -1.6068     0.1029    -0.5753 
   -0.2963    -2.9481     1.0644    -1.1882 
   -0.5002    -1.1704     0.9311    -0.6049 
   -0.9179    -0.7478    -0.1571     0.8209 
   -1.2064     0.8709    -0.6887    -0.2115 
    0.8118    -0.5851    -0.2115    -0.9635 
    0.5066    -0.0492    -0.2672    -0.4734 
PWM hg19
     A          C          G          T    
    0.3144     0.0253     0.3254     -1.085 
    0.6189    -2.2525     0.2294    -0.5149 
   -1.0542    -1.7283      1.298    -1.0815 
   -1.3501    -2.1918     1.1889    -0.2936 
   -1.0275    -0.4798      0.001     0.6488 
   -2.9481     1.4387    -1.1523    -1.9539 
    1.0998    -1.2394    -2.9481    -1.7186 
    0.5985    -0.7327     0.2136     -0.964 
    0.6049    -1.4684     0.2779    -0.7145 
   -0.4392    -2.9481     1.2445    -1.3145 
   -0.6405     -1.016     1.1106    -0.7437 
   -1.0508    -0.5834     0.0156     0.6701 
   -1.3322     1.0503    -0.5233    -0.3554 
     0.661    -0.4179    -0.0393    -1.0955 
    0.3572     0.1246    -0.0957    -0.6141