back COT1_f1 HOCOMOCO-build9-MAR2012


UniProt COT1
motif weight82.0
total sequences85
data sources JASPAR:13
TRANSFAC20112:72
motif logo
consensusSdbYWRAGKTCA
small-BiSMarkhg19 PWM
small-BiSMarkuniform PWM
thresholdshg19 PWM
thresholdsuniform PWM
WPCM
     A          C          G          T    
    6.9846     9.6247    58.4479     6.9427 
    7.6132     6.1884    40.1614    28.0369 
    9.1355    18.8167    20.2278    33.8199 
    8.3812    57.3866     5.1125    11.1197 
    62.234     6.2021     3.7715     9.7923 
   49.9692     4.2744    20.9676     6.7888 
   59.4537        0.0    21.7082     0.8381 
    1.4248        0.0    80.5752        0.0 
    1.5924     3.6877    53.4602    23.2596 
    3.1849     6.4399     2.3467    70.0285 
    0.7543    71.0762     5.4897     4.6798 
   66.8783     8.2072     3.7087     3.2058 
PPM
     A          C          G          T    
    0.0852     0.1174     0.7128     0.0847 
    0.0928     0.0755     0.4898     0.3419 
    0.1114     0.2295     0.2467     0.4124 
    0.1022     0.6998     0.0623     0.1356 
     0.759     0.0756      0.046     0.1194 
    0.6094     0.0521     0.2557     0.0828 
     0.725        0.0     0.2647     0.0102 
    0.0174        0.0     0.9826        0.0 
    0.0194      0.045      0.652     0.2837 
    0.0388     0.0785     0.0286      0.854 
    0.0092     0.8668     0.0669     0.0571 
    0.8156     0.1001     0.0452     0.0391 
PWM uniform
     A          C          G          T    
   -0.9826    -0.7001      1.014    -0.9878 
   -0.9077    -1.0863     0.6472     0.2993 
   -0.7467    -0.0811    -0.0127     0.4803 
   -0.8233     0.9961    -1.2459    -0.5696 
    1.0757    -1.0844     -1.489    -0.6846 
    0.8604    -1.3908     0.0214    -1.0071 
    1.0308    -2.9759     0.0544    -2.4102 
   -2.1459    -2.9759       1.33    -2.9759 
   -2.0817    -1.5064     0.9266     0.1202 
   -1.6173    -1.0523    -1.8349     1.1917 
   -2.4544     1.2064     -1.187    -1.3181 
    1.1464    -0.8418     -1.502    -1.6124 
PWM hg19
     A          C          G          T    
   -1.1147    -0.5344      1.194    -1.1198 
   -1.0415    -0.9288     0.8258     0.1509 
   -0.8836     0.0926     0.1617     0.3309 
   -0.9587     1.1759     -1.093    -0.7093 
    0.9239    -0.9269    -1.3445    -0.8224 
    0.7094    -1.2426     0.1961    -1.1387 
    0.8792    -2.9759     0.2293    -2.4741 
   -2.2302    -2.9759     1.5108    -2.9759 
   -2.1702    -1.3626     1.1062    -0.0269 
   -1.7299     -0.894    -1.7067     1.0397 
   -2.5144     1.3868    -1.0323    -1.4414 
    0.9945    -0.6788     -1.358    -1.7252