| UniProt |
AIRE
|
| motif weight | 41.30612 |
| total sequences | 61 |
| data sources |
TRANSFAC20112:61
|
| motif logo |
|
| consensus | hnnGGWWnddWWGGdbWh |
| small-BiSMark | hg19 PWM |
| small-BiSMark | uniform PWM |
| thresholds | hg19 PWM |
| thresholds | uniform PWM |
| WPCM | A C G T
16.4286 10.7959 5.1633 8.9184
7.5102 7.5102 5.6327 20.6531
5.6327 5.6327 8.449 21.5918
1.8776 0.0 36.6122 2.8163
0.0 0.0 33.7959 7.5102
13.1429 1.8776 0.9388 25.3469
15.9592 3.7551 0.9388 20.6531
15.0204 5.6327 5.6327 15.0204
14.0816 2.8163 5.6327 18.7755
21.5918 3.7551 5.6327 10.3265
15.9592 1.8776 2.8163 20.6531
9.3878 5.6327 2.8163 23.4694
0.0 0.9388 36.6122 3.7551
0.0 0.0 40.3673 0.9388
9.3878 3.7551 10.3265 17.8367
2.8163 7.5102 7.5102 23.4694
18.7755 0.9388 6.5714 15.0204
16.6633 11.0306 4.4592 9.1531
|
| PPM | A C G T
0.3977 0.2614 0.125 0.2159
0.1818 0.1818 0.1364 0.5
0.1364 0.1364 0.2045 0.5227
0.0455 0.0 0.8864 0.0682
0.0 0.0 0.8182 0.1818
0.3182 0.0455 0.0227 0.6136
0.3864 0.0909 0.0227 0.5
0.3636 0.1364 0.1364 0.3636
0.3409 0.0682 0.1364 0.4545
0.5227 0.0909 0.1364 0.25
0.3864 0.0455 0.0682 0.5
0.2273 0.1364 0.0682 0.5682
0.0 0.0227 0.8864 0.0909
0.0 0.0 0.9773 0.0227
0.2273 0.0909 0.25 0.4318
0.0682 0.1818 0.1818 0.5682
0.4545 0.0227 0.1591 0.3636
0.4034 0.267 0.108 0.2216
|
| PWM uniform | A C G T
0.4331 0.0409 -0.6137 -0.1336
-0.2879 -0.2879 -0.5395 0.6509
-0.5395 -0.5395 -0.1825 0.6935
-1.3886 -2.4933 1.2045 -1.1001
-2.4933 -2.4933 1.1265 -0.2879
0.2233 -1.3886 -1.7956 0.8477
0.4057 -0.8765 -1.7956 0.6509
0.3485 -0.5395 -0.5395 0.3485
0.2879 -1.1001 -0.5395 0.5599
0.6935 -0.8765 -0.5395 0.0
0.4057 -1.3886 -1.1001 0.6509
-0.0871 -0.5395 -1.1001 0.7736
-2.4933 -1.7956 1.2045 -0.8765
-2.4933 -2.4933 1.2998 -1.7956
-0.0871 -0.8765 0.0 0.5111
-1.1001 -0.2879 -0.2879 0.7736
0.5599 -1.7956 -0.4058 0.3485
0.4466 0.0607 -0.7365 -0.1101
|
| PWM hg19 | A C G T
0.2874 0.2105 -0.4566 -0.2726
-0.4243 -0.1235 -0.3805 0.5035
-0.6708 -0.3805 -0.0162 0.5458
-1.4893 -2.4933 1.3834 -1.2141
-2.4933 -2.4933 1.3051 -0.4243
0.0796 -1.2625 -1.6994 0.699
0.2602 -0.7273 -1.6994 0.5035
0.2036 -0.3805 -0.3805 0.2036
0.1435 -0.9595 -0.3805 0.4131
0.5458 -0.7273 -0.3805 -0.1409
0.2602 -1.2625 -0.9595 0.5035
-0.2268 -0.3805 -0.9595 0.6253
-2.4933 -1.6994 1.3834 -0.9985
-2.4933 -2.4933 1.4791 -1.8702
-0.2268 -0.7273 0.1691 0.3647
-1.2141 -0.1235 -0.1235 0.6253
0.4131 -1.6994 -0.2438 0.2036
0.3007 0.2306 -0.5828 -0.2494
|
