The sampler was looking for sites on both strands of 20 sequences of length from 216 through 292.
The site length found is 10.
The sampler has tested the lengths in [6,12].
The motif is formed by 20 motif sites.
All the positions are 0-based.
The description of sitesGene Id | Position | Length | Score | Direction | Site in sequence | | Site-as-in-motif |
1 | 109 | 10 | 8.758 | > | aTtATGGTGT | | aTtATGGTGT |
10 | 117 | 10 | 8.895 | > | tTtAATGTTA | | tTtAATGTTA |
11 | 100 | 10 | 4.152 | > | aTtGCGGTGT | | aTtGCGGTGT |
12 | 104 | 10 | 9.265 | < | AAACCATtAa | | tTaATGGTTT |
13 | 106 | 10 | 6.599 | < | GCATGATtAg | | cTaATCATGC |
14 | 120 | 10 | 10.25 | > | tTtATTGTTA | | tTtATTGTTA |
15 | 112 | 10 | 9.746 | < | TAACAATaAt | | aTtATTGTTA |
16 | 106 | 10 | 7.115 | > | gTaACTGTTC | | gTaACTGTTC |
17 | 103 | 10 | 7.801 | < | ACAAAATaAa | | tTtATTTTGT |
18 | 107 | 10 | 5.129 | > | aAtATTATGA | | aAtATTATGA |
19 | 111 | 10 | 7.926 | > | aTcATTGTGA | | aTcATTGTGA |
2 | 102 | 10 | 6.282 | < | GCACAGTcAg | | cTgACTGTGC |
20 | 107 | 10 | 6.007 | > | tTaATTGCCT | | tTaATTGCCT |
3 | 107 | 10 | 2.857 | < | GCCTCGTtAt | | aTaACGAGGC |
4 | 111 | 10 | 8.254 | < | GCACGATtAg | | cTaATCGTGC |
5 | 106 | 10 | 9.746 | > | cTaATTGTTT | | cTaATTGTTT |
6 | 116 | 10 | 9.657 | > | tTaAATGTGC | | tTaAATGTGC |
7 | 123 | 10 | 7.633 | < | TGACATTtAa | | tTaAATGTCA |
8 | 101 | 10 | 9.085 | < | AAACATTaAa | | tTtAATGTTT |
9 | 107 | 10 | 7.296 | > | tTaATCATTC | | tTaATCATTC |
The list of sites
1 aTtATGGTGT
10 tTtAATGTTA
11 aTtGCGGTGT
12 tTaATGGTTT
13 cTaATCATGC
14 tTtATTGTTA
15 aTtATTGTTA
16 gTaACTGTTC
17 tTtATTTTGT
18 aAtATTATGA
19 aTcATTGTGA
2 cTgACTGTGC
20 tTaATTGCCT
3 aTaACGAGGC
4 cTaATCGTGC
5 cTaATTGTTT
6 tTaAATGTGC
7 tTaAATGTCA
8 tTtAATGTTT
9 tTaATCATTC