The sampler was looking for sites on both strands of 37 sequences of length from 212 through 240.
The site length found is 11.
The sampler has tested the lengths in [6,12].
The motif is formed by 37 motif sites.
All the positions are 0-based.
The description of sitesGene Id | Position | Length | Score | Direction | Site in sequence | | Site-as-in-motif |
1 | 107 | 11 | 8.384 | > | ttTAACTTAat | | ttTAACTTAat |
10 | 107 | 11 | 4.391 | > | ttCTACTTTaa | | ttCTACTTTaa |
11 | 104 | 11 | 6.766 | < | ccACAATTAaa | | ttTAATTGTgg |
12 | 102 | 11 | 3.82 | < | tcTGAGTCAgt | | acTGACTCAga |
13 | 109 | 11 | 6.479 | > | gtCAACTCTtt | | gtCAACTCTtt |
14 | 116 | 11 | 12.51 | < | aaAAAGTCAaa | | ttTGACTTTtt |
15 | 105 | 11 | 10.39 | < | taAAAGTCAac | | gtTGACTTTta |
16 | 116 | 11 | 9.281 | > | ctTAACTCTtt | | ctTAACTCTtt |
17 | 104 | 11 | 7.072 | < | tcAAAGCCAaa | | ttTGGCTTTga |
18 | 111 | 11 | 2.302 | > | gcTAACCGAtg | | gcTAACCGAtg |
19 | 104 | 11 | 11.69 | > | ctTGACTTTtt | | ctTGACTTTtt |
2 | 104 | 11 | 8.212 | > | ttAAATTTTtt | | ttAAATTTTtt |
20 | 103 | 11 | 3.015 | > | gcTGACTTCcc | | gcTGACTTCcc |
21 | 112 | 11 | 10.11 | > | ttTGACTTTca | | ttTGACTTTca |
22 | 114 | 11 | 3.902 | > | cgAGATTTTat | | cgAGATTTTat |
23 | 106 | 11 | 5.738 | < | taTGAGTCTaa | | ttAGACTCAta |
24 | 112 | 11 | 5.331 | > | ctCAACCCTtt | | ctCAACCCTtt |
25 | 119 | 11 | 5.38 | > | atTGTCTTCtt | | atTGTCTTCtt |
26 | 114 | 11 | 4.354 | < | agAAAGTTGct | | agCAACTTTct |
27 | 101 | 11 | -1.918 | < | ccGCGATCTtc | | gaAGATCGCgg |
28 | 104 | 11 | 3.876 | > | ttGGAATTAgt | | ttGGAATTAgt |
29 | 109 | 11 | 7.938 | > | taTAACTTTat | | taTAACTTTat |
3 | 102 | 11 | 4.196 | < | aaATAATCCag | | ctGGATTATtt |
30 | 110 | 11 | 4.74 | < | tgAAAGTGAca | | tgTCACTTTca |
31 | 100 | 11 | 10.47 | > | ctTAACTTTtg | | ctTAACTTTtg |
32 | 106 | 11 | 9.852 | > | tcTGACTTTtg | | tcTGACTTTtg |
33 | 104 | 11 | 6.141 | > | taTGACCTCgt | | taTGACCTCgt |
34 | 111 | 11 | 10.46 | < | aaAAAGTTAat | | atTAACTTTtt |
35 | 105 | 11 | 9.242 | < | caTAAGTCAag | | ctTGACTTAtg |
36 | 105 | 11 | 9.427 | < | ccAAGGTCAaa | | ttTGACCTTgg |
37 | 109 | 11 | 6.643 | > | ccTGACCTTgg | | ccTGACCTTgg |
4 | 102 | 11 | 2.378 | > | cgTAATATTga | | cgTAATATTga |
5 | 103 | 11 | 3.567 | > | gtTAATCTCcg | | gtTAATCTCcg |
6 | 109 | 11 | 10.74 | < | aaGAAGTCAaa | | ttTGACTTCtt |
7 | 100 | 11 | 3.696 | > | taGGATTCTtg | | taGGATTCTtg |
8 | 103 | 11 | 5.342 | < | aaCCAGTCAat | | atTGACTGGtt |
9 | 107 | 11 | 7.32 | < | tcAAGATTAaa | | ttTAATCTTga |
The list of sites
1 ttTAACTTAat
10 ttCTACTTTaa
11 ttTAATTGTgg
12 acTGACTCAga
13 gtCAACTCTtt
14 ttTGACTTTtt
15 gtTGACTTTta
16 ctTAACTCTtt
17 ttTGGCTTTga
18 gcTAACCGAtg
19 ctTGACTTTtt
2 ttAAATTTTtt
20 gcTGACTTCcc
21 ttTGACTTTca
22 cgAGATTTTat
23 ttAGACTCAta
24 ctCAACCCTtt
25 atTGTCTTCtt
26 agCAACTTTct
27 gaAGATCGCgg
28 ttGGAATTAgt
29 taTAACTTTat
3 ctGGATTATtt
30 tgTCACTTTca
31 ctTAACTTTtg
32 tcTGACTTTtg
33 taTGACCTCgt
34 atTAACTTTtt
35 ctTGACTTAtg
36 ttTGACCTTgg
37 ccTGACCTTgg
4 cgTAATATTga
5 gtTAATCTCcg
6 ttTGACTTCtt
7 taGGATTCTtg
8 atTGACTGGtt
9 ttTAATCTTga