The sampler was looking for sites on both strands of 16 sequences of length from 214 through 231.
The site length found is 11.
The sampler has tested the lengths in [6,12].
The motif is formed by 16 motif sites.
All the positions are 0-based.
The description of sitesGene Id | Position | Length | Score | Direction | Site in sequence | | Site-as-in-motif |
1 | 102 | 11 | 8.713 | > | ttTAATTTGgt | | ttTAATTTGgt |
10 | 102 | 11 | 7.312 | > | ttAAATGGTct | | ttAAATGGTct |
11 | 103 | 11 | 8.45 | > | ctTCATTATgg | | ctTCATTATgg |
12 | 101 | 11 | 7.906 | < | gcGAAATTAaa | | ttTAATTTCgc |
13 | 102 | 11 | 5.254 | > | ggTAATGGGtg | | ggTAATGGGtg |
14 | 103 | 11 | 9.813 | > | tgTAATTATtt | | tgTAATTATtt |
15 | 102 | 11 | 11.45 | > | ttTAATTGTtt | | ttTAATTGTtt |
16 | 102 | 11 | 9.394 | > | ttTAATGACta | | ttTAATGACta |
2 | 106 | 11 | 7.406 | < | cgGCTATTAag | | ctTAATAGCcg |
3 | 107 | 11 | 9.058 | > | atTAATTATga | | atTAATTATga |
4 | 105 | 11 | 8.549 | < | cgATAAGTAaa | | ttTACTTATcg |
5 | 103 | 11 | 7.353 | < | ctATCATTAga | | tcTAATGATag |
6 | 100 | 11 | 7.28 | < | aaACAATTAtc | | gaTAATTGTtt |
7 | 108 | 11 | 10.71 | > | ctTAATTACgg | | ctTAATTACgg |
8 | 104 | 11 | 10.58 | < | acATCATTAag | | ctTAATGATgt |
9 | 102 | 11 | 7.058 | < | tgGCAATTAgg | | ccTAATTGCca |
The list of sites
1 ttTAATTTGgt
10 ttAAATGGTct
11 ctTCATTATgg
12 ttTAATTTCgc
13 ggTAATGGGtg
14 tgTAATTATtt
15 ttTAATTGTtt
16 ttTAATGACta
2 ctTAATAGCcg
3 atTAATTATga
4 ttTACTTATcg
5 tcTAATGATag
6 gaTAATTGTtt
7 ctTAATTACgg
8 ctTAATGATgt
9 ccTAATTGCca