The sampler was looking for sites on both strands of 41 sequences of length from 208 through 234.
The site length found is 8.
The sampler has tested the lengths in [6,8].
The motif is formed by 41 motif sites.
All the positions are 0-based.
The description of sitesGene Id | Position | Length | Score | Direction | Site in sequence | | Site-as-in-motif |
1 | 100 | 8 | 8.769 | > | tCGAGtGa | | tCGAGtGa |
10 | 100 | 8 | 6.545 | < | tCgCTCAg | | cTGAGcGa |
11 | 100 | 8 | 10.27 | > | tTGAGtGg | | tTGAGtGg |
12 | 105 | 8 | 10.65 | < | tCaCTCAa | | tTGAGtGa |
13 | 105 | 8 | 6.577 | < | tCaCTCGc | | gCGAGtGa |
14 | 105 | 8 | 6.81 | < | cCgCTCAc | | gTGAGcGg |
15 | 105 | 8 | 7.96 | < | aCgCTCAa | | tTGAGcGt |
16 | 100 | 8 | 10.27 | < | cCaCTCAa | | tTGAGtGg |
17 | 100 | 8 | 9.232 | > | tTGAGtGt | | tTGAGtGt |
18 | 100 | 8 | 10.27 | < | cCaCTCAa | | tTGAGtGg |
19 | 100 | 8 | 6.639 | > | tGGAGtGc | | tGGAGtGc |
2 | 100 | 8 | 9.003 | > | tTGAGcGg | | tTGAGcGg |
20 | 100 | 8 | 8.769 | > | tCGAGtGa | | tCGAGtGa |
21 | 100 | 8 | 6.041 | < | tAtCTCAt | | aTGAGaTa |
22 | 102 | 8 | 8.265 | < | cGaCTCAa | | tTGAGtCg |
23 | 108 | 8 | 7.375 | > | aCGAGtGg | | aCGAGtGg |
24 | 107 | 8 | 7.96 | < | aCgCTCAa | | tTGAGcGt |
25 | 105 | 8 | 8.5 | > | tTGAGcGc | | tTGAGcGc |
26 | 107 | 8 | 9.232 | > | tTGAGtGt | | tTGAGtGt |
27 | 113 | 8 | 3.289 | < | gAtCTCGt | | aCGAGaTc |
28 | 101 | 8 | 4.129 | > | gCGAGaGc | | gCGAGaGc |
29 | 111 | 8 | 4.042 | > | aAGAGaGc | | aAGAGaGc |
3 | 100 | 8 | 8.265 | < | cGaCTCAa | | tTGAGtCg |
30 | 106 | 8 | 7.064 | > | tTGAGaCa | | tTGAGaCa |
31 | 104 | 8 | 3.747 | > | gGGAGaGa | | gGGAGaGa |
32 | 107 | 8 | 5.218 | < | tCgCTCTt | | aAGAGcGa |
33 | 104 | 8 | 8.637 | > | tTGAGtTa | | tTGAGtTa |
34 | 106 | 8 | 6.343 | < | tGgCTCAt | | aTGAGcCa |
35 | 103 | 8 | 9.772 | > | tTGAGtGc | | tTGAGtGc |
36 | 103 | 8 | 0.9667 | > | tTGCGgTg | | tTGCGgTg |
37 | 109 | 8 | 8.75 | < | gCaCTCAt | | aTGAGtGc |
38 | 104 | 8 | 4.928 | < | aGgCTCAt | | aTGAGcCt |
39 | 108 | 8 | 7.615 | > | aTGAGtCa | | aTGAGtCa |
4 | 106 | 8 | 9.772 | < | gCaCTCAa | | tTGAGtGc |
40 | 123 | 8 | 6.76 | > | tCGAGtTa | | tCGAGtTa |
41 | 105 | 8 | 6.041 | > | aTGAGaTa | | aTGAGaTa |
5 | 100 | 8 | 10.27 | > | tTGAGtGg | | tTGAGtGg |
6 | 100 | 8 | 10.65 | > | tTGAGtGa | | tTGAGtGa |
7 | 100 | 8 | 7.445 | > | cTGAGtGg | | cTGAGtGg |
8 | 100 | 8 | 10.27 | > | tTGAGtGg | | tTGAGtGg |
9 | 100 | 8 | 9.624 | < | tCaCTCAt | | aTGAGtGa |
The list of sites
1 tCGAGtGa
10 cTGAGcGa
11 tTGAGtGg
12 tTGAGtGa
13 gCGAGtGa
14 gTGAGcGg
15 tTGAGcGt
16 tTGAGtGg
17 tTGAGtGt
18 tTGAGtGg
19 tGGAGtGc
2 tTGAGcGg
20 tCGAGtGa
21 aTGAGaTa
22 tTGAGtCg
23 aCGAGtGg
24 tTGAGcGt
25 tTGAGcGc
26 tTGAGtGt
27 aCGAGaTc
28 gCGAGaGc
29 aAGAGaGc
3 tTGAGtCg
30 tTGAGaCa
31 gGGAGaGa
32 aAGAGcGa
33 tTGAGtTa
34 aTGAGcCa
35 tTGAGtGc
36 tTGCGgTg
37 aTGAGtGc
38 aTGAGcCt
39 aTGAGtCa
4 tTGAGtGc
40 tCGAGtTa
41 aTGAGaTa
5 tTGAGtGg
6 tTGAGtGa
7 cTGAGtGg
8 tTGAGtGg
9 aTGAGtGa