The sampler was looking for sites on both strands of 66 sequences of length from 214 through 270.
The site length found is 11.
The sampler has tested the lengths in [6,12].
The motif is formed by 66 motif sites.
All the positions are 0-based.
The description of sitesGene Id | Position | Length | Score | Direction | Site in sequence | | Site-as-in-motif |
1 | 102 | 11 | 6.989 | < | ctcTAATTagc | | gctAATTAgag |
10 | 100 | 11 | 1.32 | > | cggATTTAtga | | cggATTTAtga |
11 | 104 | 11 | 7.182 | > | ttcAATTAacc | | ttcAATTAacc |
12 | 114 | 11 | 9.801 | < | attTAATTgac | | gtcAATTAaat |
13 | 102 | 11 | -2.51 | < | tgcGGTGTgtc | | gacACACCgca |
14 | 105 | 11 | 9.195 | > | aacCATTAaca | | aacCATTAaca |
15 | 117 | 11 | 8.338 | > | ggcCATTAcaa | | ggcCATTAcaa |
16 | 102 | 11 | 5.583 | > | gtgCATTAgag | | gtgCATTAgag |
17 | 109 | 11 | 7.599 | < | tcaTAATTttc | | gaaAATTAtga |
18 | 103 | 11 | 3.048 | < | gctAAAGTgtc | | gacACTTTagc |
19 | 104 | 11 | 4.057 | > | ccaAATTAgcc | | ccaAATTAgcc |
2 | 102 | 11 | 7.636 | < | ggcTAATTggc | | gccAATTAgcc |
20 | 103 | 11 | 2.601 | < | acaAAATGtct | | agaCATTTtgt |
21 | 113 | 11 | 5.041 | > | tgcCATTAcag | | tgcCATTAcag |
22 | 105 | 11 | 3.727 | > | tcgCATTAgac | | tcgCATTAgac |
23 | 102 | 11 | 7.13 | < | tgtTTATGgat | | atcCATAAaca |
24 | 116 | 11 | 10.92 | < | tctTAATTgcc | | ggcAATTAaga |
25 | 128 | 11 | 6.428 | < | ataTTATTggc | | gccAATAAtat |
26 | 105 | 11 | 9.697 | < | tgtTAATGgac | | gtcCATTAaca |
27 | 105 | 11 | 4.809 | > | aggTATTAaga | | aggTATTAaga |
28 | 103 | 11 | 4.507 | > | cttCATTAtat | | cttCATTAtat |
29 | 106 | 11 | 2.826 | < | ttaTAGTGcac | | gtgCACTAtaa |
3 | 102 | 11 | 9.801 | < | attTAATTgac | | gtcAATTAaat |
30 | 109 | 11 | 0.09353 | < | gtaCAAGGtat | | ataCCTTGtac |
31 | 106 | 11 | 3.337 | > | tgaCATTAttt | | tgaCATTAttt |
32 | 107 | 11 | 4.665 | > | agcCATCAatc | | agcCATCAatc |
33 | 107 | 11 | 7.116 | > | ggcCATAAgca | | ggcCATAAgca |
34 | 109 | 11 | 6.181 | < | tcaTCATTgct | | agcAATGAtga |
35 | 106 | 11 | 6.703 | > | gacAATTCgaa | | gacAATTCgaa |
36 | 109 | 11 | 7.083 | > | agcAATTAcag | | agcAATTAcag |
37 | 105 | 11 | 6.82 | > | ggcAATTCaag | | ggcAATTCaag |
38 | 105 | 11 | 6.65 | < | cttTGATTggt | | accAATCAaag |
39 | 109 | 11 | 5.717 | > | accCATTGaga | | accCATTGaga |
4 | 102 | 11 | 5.606 | < | gatTAATTcct | | aggAATTAatc |
40 | 110 | 11 | 3.52 | < | actTCATTtat | | ataAATGAagt |
41 | 108 | 11 | 8.885 | < | cctTAATTgct | | agcAATTAagg |
42 | 106 | 11 | 9.019 | < | attTAATGgac | | gtcCATTAaat |
43 | 102 | 11 | 3.243 | > | gctAATAGtaa | | gctAATAGtaa |
44 | 107 | 11 | 2.692 | < | tacTTATGtca | | tgaCATAAgta |
45 | 133 | 11 | 3.991 | > | ggtTATTAtta | | ggtTATTAtta |
46 | 107 | 11 | 2.825 | < | gacTGATTgcg | | cgcAATCAgtc |
47 | 127 | 11 | 5.849 | < | ttaTGATTatt | | aatAATCAtaa |
48 | 127 | 11 | 5.966 | > | gacAATTGgga | | gacAATTGgga |
49 | 109 | 11 | 10.89 | > | atcAATTAaaa | | atcAATTAaaa |
5 | 103 | 11 | 8.287 | > | gacCATAAaaa | | gacCATAAaaa |
50 | 110 | 11 | 5.722 | > | tacAATTTaca | | tacAATTTaca |
51 | 109 | 11 | 6.432 | > | agtACTTAtaa | | agtACTTAtaa |
52 | 107 | 11 | 8.833 | < | tctTAATTaac | | gttAATTAaga |
53 | 105 | 11 | 3.503 | > | agcAAATTaag | | agcAAATTaag |
54 | 108 | 11 | 5.308 | > | aatAATAAtca | | aatAATAAtca |
55 | 102 | 11 | 3.607 | > | tcaCATCAgaa | | tcaCATCAgaa |
56 | 123 | 11 | 7.833 | > | tgaAATTAaca | | tgaAATTAaca |
57 | 108 | 11 | 8.534 | > | ggcACTTAaca | | ggcACTTAaca |
58 | 125 | 11 | 6.627 | < | agtTAATGatc | | gatCATTAact |
59 | 106 | 11 | 4.023 | < | ttcTCATGtgt | | acaCATGAgaa |
6 | 103 | 11 | 6.612 | > | agcACTTAact | | agcACTTAact |
60 | 105 | 11 | 3.282 | > | cacACATAaaa | | cacACATAaaa |
61 | 108 | 11 | 11.14 | > | ggcCATTAaaa | | ggcCATTAaaa |
62 | 114 | 11 | 7 | > | gctCATTAgca | | gctCATTAgca |
63 | 100 | 11 | 7.499 | < | tttTTATTagc | | gctAATAAaaa |
64 | 103 | 11 | 7.325 | < | ttaTGATTgtt | | aacAATCAtaa |
65 | 100 | 11 | 2.677 | < | cctATATTacc | | ggtAATATagg |
66 | 104 | 11 | 7.623 | < | attTAATTtgt | | acaAATTAaat |
7 | 103 | 11 | 10.48 | > | gtcAATTAaca | | gtcAATTAaca |
8 | 102 | 11 | 3.743 | > | gtcACATAaag | | gtcACATAaag |
9 | 102 | 11 | 5.563 | < | gccTAATTgtg | | cacAATTAggc |
The list of sites
1 gctAATTAgag
10 cggATTTAtga
11 ttcAATTAacc
12 gtcAATTAaat
13 gacACACCgca
14 aacCATTAaca
15 ggcCATTAcaa
16 gtgCATTAgag
17 gaaAATTAtga
18 gacACTTTagc
19 ccaAATTAgcc
2 gccAATTAgcc
20 agaCATTTtgt
21 tgcCATTAcag
22 tcgCATTAgac
23 atcCATAAaca
24 ggcAATTAaga
25 gccAATAAtat
26 gtcCATTAaca
27 aggTATTAaga
28 cttCATTAtat
29 gtgCACTAtaa
3 gtcAATTAaat
30 ataCCTTGtac
31 tgaCATTAttt
32 agcCATCAatc
33 ggcCATAAgca
34 agcAATGAtga
35 gacAATTCgaa
36 agcAATTAcag
37 ggcAATTCaag
38 accAATCAaag
39 accCATTGaga
4 aggAATTAatc
40 ataAATGAagt
41 agcAATTAagg
42 gtcCATTAaat
43 gctAATAGtaa
44 tgaCATAAgta
45 ggtTATTAtta
46 cgcAATCAgtc
47 aatAATCAtaa
48 gacAATTGgga
49 atcAATTAaaa
5 gacCATAAaaa
50 tacAATTTaca
51 agtACTTAtaa
52 gttAATTAaga
53 agcAAATTaag
54 aatAATAAtca
55 tcaCATCAgaa
56 tgaAATTAaca
57 ggcACTTAaca
58 gatCATTAact
59 acaCATGAgaa
6 agcACTTAact
60 cacACATAaaa
61 ggcCATTAaaa
62 gctCATTAgca
63 gctAATAAaaa
64 aacAATCAtaa
65 ggtAATATagg
66 acaAATTAaat
7 gtcAATTAaca
8 gtcACATAaag
9 cacAATTAggc