The sampler has failed by failing all the 3 chains. Initial pattern length was 10.
The sampler was looking for sites on both strands of 17 sequences of length from 217 through 246.
The site length found is 11.
The sampler has tested the lengths in [6,12].
The motif is formed by 17 motif sites.
All the positions are 0-based.
The description of sitesGene Id | Position | Length | Score | Direction | Site in sequence | | Site-as-in-motif |
1 | 106 | 11 | 3.162 | > | TcTcAgAACaA | | TcTcAgAACaA |
10 | 115 | 11 | 8.089 | > | TgTtCcAAAtA | | TgTtCcAAAtA |
11 | 109 | 11 | 8.362 | < | GaATTtGgAtT | | AaTcCaAATtC |
12 | 119 | 11 | 8.431 | > | AaTtCcAATcC | | AaTtCcAATcC |
13 | 107 | 11 | 5.553 | > | GgTcCtAACtC | | GgTcCtAACtC |
14 | 100 | 11 | 5.17 | < | TgTTAtTaAtA | | TaTtAaTAAcA |
15 | 100 | 11 | 8.312 | > | AgTgCtAATcA | | AgTgCtAATcA |
16 | 104 | 11 | 10.54 | > | AaTaCtAATtA | | AaTaCtAATtA |
17 | 110 | 11 | 8.651 | < | TaGTTaTaAtA | | TaTtAtAACtA |
2 | 114 | 11 | 6.557 | < | TgATTgGtCtC | | GaGaCcAATcA |
3 | 108 | 11 | 7.921 | < | TaATTgGcAaA | | TtTgCcAATtA |
4 | 106 | 11 | 6.077 | > | AtGtCtAACcA | | AtGtCtAACcA |
5 | 103 | 11 | 8.821 | > | AaTaAtAAAcA | | AaTaAtAAAcA |
6 | 122 | 11 | 6.716 | < | TaTTTgTgAaA | | TtTcAcAAAtA |
7 | 106 | 11 | 5.064 | < | AcATTtGtAtC | | GaTaCaAATgT |
8 | 115 | 11 | 8.327 | > | AaTgCaAAAaA | | AaTgCaAAAaA |
9 | 119 | 11 | 6.804 | < | AtGTTtGtAtT | | AaTaCaAACaT |
The list of sites
1 TcTcAgAACaA
10 TgTtCcAAAtA
11 AaTcCaAATtC
12 AaTtCcAATcC
13 GgTcCtAACtC
14 TaTtAaTAAcA
15 AgTgCtAATcA
16 AaTaCtAATtA
17 TaTtAtAACtA
2 GaGaCcAATcA
3 TtTgCcAATtA
4 AtGtCtAACcA
5 AaTaAtAAAcA
6 TtTcAcAAAtA
7 GaTaCaAATgT
8 AaTgCaAAAaA
9 AaTaCaAACaT