The sampler was looking for sites on both strands of 8 sequences of length from 217 through 246.
The site length found is 11.
The sampler has tested the lengths in [6,12].
The motif is formed by 8 motif sites.
All the positions are 0-based.
The description of sitesGene Id | Position | Length | Score | Direction | Site in sequence | | Site-as-in-motif |
1 | 100 | 11 | 10.48 | > | AtAAATAATAA | | AtAAATAATAA |
2 | 100 | 11 | 6.107 | > | AaGTAAACTAA | | AaGTAAACTAA |
3 | 118 | 11 | 8.99 | < | TAAATATTTgT | | AcAAATATTTA |
4 | 110 | 11 | 8.967 | > | AgAGCTAATAT | | AgAGCTAATAT |
5 | 105 | 11 | 10.41 | < | TTAATAGAAgT | | AcTTCTATTAA |
6 | 100 | 11 | 9.745 | > | AgTGCTAATCA | | AgTGCTAATCA |
7 | 104 | 11 | 10.41 | > | AaTACTAATTA | | AaTACTAATTA |
8 | 111 | 11 | 11.94 | > | AgTTATAATAA | | AgTTATAATAA |
The list of sites
1 AtAAATAATAA
2 AaGTAAACTAA
3 AcAAATATTTA
4 AgAGCTAATAT
5 AcTTCTATTAA
6 AgTGCTAATCA
7 AaTACTAATTA
8 AgTTATAATAA