The sampler was looking for sites on both strands of 12 sequences of length from 221 through 231.
The site length found is 9.
The sampler has tested the lengths in [6,9].
The motif is formed by 12 motif sites.
All the positions are 0-based.
The description of sitesGene Id | Position | Length | Score | Direction | Site in sequence | | Site-as-in-motif |
1 | 111 | 9 | 10.57 | < | AgTAACAGt | | aCTGTTAcT |
10 | 110 | 9 | 6 | > | cCTGTTAtC | | cCTGTTAtC |
11 | 105 | 9 | 6.236 | > | aCCGATAgC | | aCCGATAgC |
12 | 106 | 9 | 11.39 | > | aCCGTTAcT | | aCCGTTAcT |
2 | 111 | 9 | 7.862 | > | gCCGTTAaA | | gCCGTTAaA |
3 | 109 | 9 | 10.57 | < | TgTAACTGt | | aCAGTTAcA |
4 | 107 | 9 | 9.109 | > | aCAGTTAgA | | aCAGTTAgA |
5 | 108 | 9 | 10.57 | > | aCAGTTAcA | | aCAGTTAcA |
6 | 106 | 9 | 7.269 | > | tCCGTTGcT | | tCCGTTGcT |
7 | 106 | 9 | 9.109 | > | cCTGTTAcT | | cCTGTTAcT |
8 | 107 | 9 | 8.481 | > | tCCGTTAaT | | tCCGTTAaT |
9 | 110 | 9 | 11.39 | > | aCCGTTAcA | | aCCGTTAcA |
The list of sites
1 aCTGTTAcT
10 cCTGTTAtC
11 aCCGATAgC
12 aCCGTTAcT
2 gCCGTTAaA
3 aCAGTTAcA
4 aCAGTTAgA
5 aCAGTTAcA
6 tCCGTTGcT
7 cCTGTTAcT
8 tCCGTTAaT
9 aCCGTTAcA