Looking for DNA motifs Gibbs sampler (SeSiMCMC) result.

Input FastA file name: 199689_0_18_MAR_14_48_49_extlz_sesimcmc.fasta

The slow optimisation mode makes no sense when the site lenght is pre-given.` The sampler was looking for sites on both strands of 17 sequences of length from 217 through 246.

The site length found is 8.
The motif is formed by 17 motif sites.

All the positions are 0-based.

The description of sites
Gene IdPositionLengthScoreDirectionSite in sequenceSite-as-in-motif
111086.252<AGAACAAATTTGTTCT
1011686.526<GTTCCAAATTTGGAAC
1111288.562>TTTGGATTTTTGGATT
1210987.509>TTAGTTTTTTAGTTTT
1310786.206<GGTCCTAATTAGGACC
1410286.548>TTATTAATTTATTAAT
1510086.664<AGTGCTAATTAGCACT
1610489.819<AATACTAATTAGTATT
1710286.09<GATGATAATTATCATC
211784.489>TTGGTCTCTTGGTCTC
310087.279>TGTGTATCTGTGTATC
410783.597>TGTCTAACTGTCTAAC
510388.126<AATAATAATTATTATT
610788.035>TTTCTATTTTTCTATT
710989.682>TTTGTATCTTTGTATC
811588.562<AATGCAAATTTGCATT
9122810.14>TTTGTATTTTTGTATT

The list of sites
 1    TTTGTTCT
 10   TTTGGAAC
 11   TTTGGATT
 12   TTAGTTTT
 13   TTAGGACC
 14   TTATTAAT
 15   TTAGCACT
 16   TTAGTATT
 17   TTATCATC
 2    TTGGTCTC
 3    TGTGTATC
 4    TGTCTAAC
 5    TTATTATT
 6    TTTCTATT
 7    TTTGTATC
 8    TTTGCATT
 9    TTTGTATT