The sampler was looking for sites on both strands of 15 sequences of length from 212 through 244.
The site length found is 9.
The sampler has tested the lengths in [6,12].
The motif is formed by 15 motif sites.
All the positions are 0-based.
The description of sitesGene Id | Position | Length | Score | Direction | Site in sequence | | Site-as-in-motif |
1 | 105 | 9 | 10.57 | > | CATaTGTTg | | CATaTGTTg |
10 | 107 | 9 | 11.42 | > | CATgTGTTg | | CATgTGTTg |
11 | 100 | 9 | 6.885 | > | TGTgTGTTg | | TGTgTGTTg |
12 | 105 | 9 | 4.165 | < | aAACAgCCG | | CGGcTGTTt |
13 | 134 | 9 | 8.878 | > | CATaTGTGa | | CATaTGTGa |
14 | 127 | 9 | 10.54 | > | CATgTGTGg | | CATgTGTGg |
15 | 105 | 9 | 10.57 | < | cAACAtATG | | CATaTGTTg |
2 | 102 | 9 | 9.185 | < | gAGCAcATG | | CATgTGCTc |
3 | 107 | 9 | 7.221 | > | CATtTGGTg | | CATtTGGTg |
4 | 107 | 9 | 7.599 | > | CACgTGTGc | | CACgTGTGc |
5 | 103 | 9 | 9.756 | > | CATaTGTTa | | CATaTGTTa |
6 | 100 | 9 | 5.591 | < | tCCCAcCTG | | CAGgTGGGa |
7 | 110 | 9 | 9.488 | > | CGTgTGTTc | | CGTgTGTTc |
8 | 102 | 9 | 7.492 | < | gCACAcATT | | AATgTGTGc |
9 | 107 | 9 | 4.663 | > | CATcGGCTc | | CATcGGCTc |
The list of sites
1 CATaTGTTg
10 CATgTGTTg
11 TGTgTGTTg
12 CGGcTGTTt
13 CATaTGTGa
14 CATgTGTGg
15 CATaTGTTg
2 CATgTGCTc
3 CATtTGGTg
4 CACgTGTGc
5 CATaTGTTa
6 CAGgTGGGa
7 CGTgTGTTc
8 AATgTGTGc
9 CATcGGCTc