The sampler was looking for sites on both strands of 11 sequences of length from 211 through 222.
The site length found is 10.
The sampler has tested the lengths in [6,10].
The motif is formed by 11 motif sites.
All the positions are 0-based.
The description of sitesGene Id | Position | Length | Score | Direction | Site in sequence | | Site-as-in-motif |
1 | 101 | 10 | 13.87 | < | TCTCAAGTGG | | CCACTTGAGA |
10 | 100 | 10 | 12.23 | < | TGTCAAGTGG | | CCACTTGACA |
11 | 100 | 10 | 13.87 | < | TCTCAAGTGG | | CCACTTGAGA |
2 | 102 | 10 | 13.04 | > | CCACTTGAGC | | CCACTTGAGC |
3 | 100 | 10 | 8.06 | > | TCACTTCACA | | TCACTTCACA |
4 | 101 | 10 | 11.73 | > | GCACTTAAGA | | GCACTTAAGA |
5 | 101 | 10 | 10.81 | > | GCCCTTGAGA | | GCCCTTGAGA |
6 | 101 | 10 | 12.6 | > | CCACTTGAGG | | CCACTTGAGG |
7 | 106 | 10 | 12.1 | > | GCACTTGAGG | | GCACTTGAGG |
8 | 107 | 10 | 8.831 | > | CCACTTAGGC | | CCACTTAGGC |
9 | 106 | 10 | 10.27 | < | GTTCAAGTGC | | GCACTTGAAC |
The list of sites
1 CCACTTGAGA
10 CCACTTGACA
11 CCACTTGAGA
2 CCACTTGAGC
3 TCACTTCACA
4 GCACTTAAGA
5 GCCCTTGAGA
6 CCACTTGAGG
7 GCACTTGAGG
8 CCACTTAGGC
9 GCACTTGAAC