Looking for DNA motifs Gibbs sampler (SeSiMCMC) result.

Input FastA file name: 398080_0_18_MAR_14_50_13_extlz_sesimcmc.fasta

The slow optimisation mode makes no sense when the site lenght is pre-given.
The sampler was looking for sites on both strands of 11 sequences of length from 219 through 242.

The site length found is 8.
The motif is formed by 11 motif sites.

All the positions are 0-based.

The description of sites
Gene IdPositionLengthScoreDirectionSite in sequenceSite-as-in-motif
112988.388>GTTAtCGCGTTAtCGC
1010184.79>GTGGtCGCGTGGtCGC
1111386.75>TTTGaCACTTTGaCAC
211288.616>ATTAgCACATTAgCAC
310287.462<GTTaTAATATTAtAAC
411085.216<TTGcTAAATTTAgCAA
511287.562<GCGaAAATATTTtCGC
611287.759>ATTAcCGCATTAcCGC
710087.462<GTCaTAATATTAtGAC
810988.616>ATTAaCACATTAaCAC
911087.793>TTTGtCGCTTTGtCGC

The list of sites
 1    GTTAtCGC
 10   GTGGtCGC
 11   TTTGaCAC
 2    ATTAgCAC
 3    ATTAtAAC
 4    TTTAgCAA
 5    ATTTtCGC
 6    ATTAcCGC
 7    ATTAtGAC
 8    ATTAaCAC
 9    TTTGtCGC