The sampler was looking for sites on both strands of 9 sequences of length from 221 through 237.
The site length found is 12.
The sampler has tested the lengths in [6,12].
The motif is formed by 9 motif sites.
All the positions are 0-based.
The description of sitesGene Id | Position | Length | Score | Direction | Site in sequence | | Site-as-in-motif |
1 | 106 | 12 | 11.08 | > | AAGTGCTAATTT | | AAGTGCTAATTT |
2 | 106 | 12 | 11.93 | > | AGGTGCGATATC | | AGGTGCGATATC |
3 | 106 | 12 | 11.42 | > | AAGTGCGACTTT | | AAGTGCGACTTT |
4 | 120 | 12 | 12.55 | < | GAAATCGCACTT | | AAGTGCGATTTC |
5 | 104 | 12 | 7.915 | < | ATTTTTTCACCT | | AGGTGAAAAAAT |
6 | 104 | 12 | 7.361 | < | GTTGTAACACAT | | ATGTGTTACAAC |
7 | 117 | 12 | 8.932 | < | CAATTTGCACAA | | TTGTGCAAATTG |
8 | 110 | 12 | 5.759 | > | CGACGCGATTTC | | CGACGCGATTTC |
9 | 103 | 12 | 6.534 | > | ATGTGCATTCAG | | ATGTGCATTCAG |
The list of sites
1 AAGTGCTAATTT
2 AGGTGCGATATC
3 AAGTGCGACTTT
4 AAGTGCGATTTC
5 AGGTGAAAAAAT
6 ATGTGTTACAAC
7 TTGTGCAAATTG
8 CGACGCGATTTC
9 ATGTGCATTCAG