Looking for DNA motifs Gibbs sampler (SeSiMCMC) result.

Input FastA file name: 246281_0_03_MAR_22_29_52_extlz_sesimcmc.fasta

The best information content for different site lengthes:

Length
6-0.023275
7-0.00693962
8-0.011137
9-0.00818554
100.00357836
110.00248494
120.00483052***

The sampler was looking for sites on both strands of 11 sequences of length from 219 through 242.

The site length found is 12.
The sampler has tested the lengths in [6,12].
The motif is formed by 11 motif sites.

All the positions are 0-based.

The description of sites
Gene IdPositionLengthScoreDirectionSite in sequenceSite-as-in-motif
1125127.467>ccTCGTTAtCGCccTCGTTAtCGC
10101126.042<GTGgTCGCTGcgcgCAGCGAcCAC
11101126.911>gcCAATGAtCGAgcCAATGAtCGA
21081210.67>caCGATTAgCACcaCGATTAgCAC
3102127.499<GTTaTAATTTatatAAATTAtAAC
4110125.724<TTGcTAAACAtgcaTGTTTAgCAA
5112126.883<GCGaAAATCGcatgCGATTTtCGC
6108129.109>ctAAATTAcCGCctAAATTAcCGC
71001210.38<GTCaTAATTGcgcgCAATTAtGAC
8105128.768>aaCCATTAaCACaaCCATTAaCAC
9127127.321>ggCCATTAcAAAggCCATTAcAAA

The list of sites
 1    ccTCGTTAtCGC
 10   cgCAGCGAcCAC
 11   gcCAATGAtCGA
 2    caCGATTAgCAC
 3    atAAATTAtAAC
 4    caTGTTTAgCAA
 5    tgCGATTTtCGC
 6    ctAAATTAcCGC
 7    cgCAATTAtGAC
 8    aaCCATTAaCAC
 9    ggCCATTAcAAA