The sampler was looking for sites on both strands of 8 sequences of length from 216 through 249.
The site length found is 10.
The sampler has tested the lengths in [6,10].
The motif is formed by 8 motif sites.
All the positions are 0-based.
The description of sitesGene Id | Position | Length | Score | Direction | Site in sequence | | Site-as-in-motif |
1 | 106 | 10 | 7.555 | < | ATTATTAGTC | | GACTAATAAT |
2 | 105 | 10 | 7.259 | < | TTTATTGCAG | | CTGCAATAAA |
3 | 104 | 10 | 10.81 | > | AAGTCATAAA | | AAGTCATAAA |
4 | 108 | 10 | 10.07 | > | GCGTCATAAA | | GCGTCATAAA |
5 | 102 | 10 | 9.219 | < | AATTTTACGT | | ACGTAAAATT |
6 | 106 | 10 | 7.666 | > | ACGCACAAAA | | ACGCACAAAA |
7 | 104 | 10 | 10.18 | > | AAGTCAAAAA | | AAGTCAAAAA |
8 | 104 | 10 | 9.841 | > | ACGTAATATT | | ACGTAATATT |
The list of sites
1 GACTAATAAT
2 CTGCAATAAA
3 AAGTCATAAA
4 GCGTCATAAA
5 ACGTAAAATT
6 ACGCACAAAA
7 AAGTCAAAAA
8 ACGTAATATT