The sampler was looking for sites on both strands of 12 sequences of length from 219 through 288.
The site length found is 8.
The sampler has tested the lengths in [6,9].
The motif is formed by 12 motif sites.
All the positions are 0-based.
The description of sitesGene Id | Position | Length | Score | Direction | Site in sequence | | Site-as-in-motif |
1 | 112 | 8 | 11.13 | > | TTTAaTTT | | TTTAaTTT |
10 | 142 | 8 | 9.77 | > | ATTAtTTT | | ATTAtTTT |
11 | 136 | 8 | 9.439 | < | ATAaTAAA | | TTTAtTAT |
12 | 121 | 8 | 9.439 | > | TTTAtTAT | | TTTAtTAT |
2 | 101 | 8 | 6.541 | > | TTCAaTTA | | TTCAaTTA |
3 | 126 | 8 | 11.13 | > | TTTAaTTT | | TTTAaTTT |
4 | 107 | 8 | 10.27 | < | AAAtTAAT | | ATTAaTTT |
5 | 104 | 8 | 6.962 | > | TTTAaTCA | | TTTAaTCA |
6 | 110 | 8 | 9.253 | > | TTTAcTTT | | TTTAcTTT |
7 | 114 | 8 | 8.388 | > | ATTAgTTT | | ATTAgTTT |
8 | 101 | 8 | 9.07 | < | ATAtTAAT | | ATTAaTAT |
9 | 114 | 8 | 10.64 | < | AAAaTAAA | | TTTAtTTT |
The list of sites
1 TTTAaTTT
10 ATTAtTTT
11 TTTAtTAT
12 TTTAtTAT
2 TTCAaTTA
3 TTTAaTTT
4 ATTAaTTT
5 TTTAaTCA
6 TTTAcTTT
7 ATTAgTTT
8 ATTAaTAT
9 TTTAtTTT