The sampler was looking for sites on both strands of 19 sequences of length from 221 through 241.
The site length found is 13.
The sampler has tested the lengths in [6,18].
The motif is formed by 19 motif sites.
All the positions are 0-based.
The description of sitesGene Id | Position | Length | Score | Direction | Site in sequence | | Site-as-in-motif |
1 | 107 | 13 | 7.913 | < | gGAAATATCTTTG | | CAAAGATATTTCc |
10 | 115 | 13 | 11.54 | < | tGAAATTACATTG | | CAATGTAATTTCa |
11 | 103 | 13 | 7.869 | > | GATTGGAATGGGa | | GATTGGAATGGGa |
12 | 106 | 13 | 12.02 | > | CAATGTAATTCGa | | CAATGTAATTCGa |
13 | 101 | 13 | 6.664 | < | cCCTCTTACATTT | | AAATGTAAGAGGg |
14 | 110 | 13 | 5.936 | > | CATACATATTCTa | | CATACATATTCTa |
15 | 101 | 13 | 4.598 | > | ATATCAAAAATGt | | ATATCAAAAATGt |
16 | 106 | 13 | 7.328 | < | cGAAATGCGTTTT | | AAAACGCATTTCg |
17 | 104 | 13 | 7.693 | > | GAAAGAAATAGTt | | GAAAGAAATAGTt |
18 | 101 | 13 | 6.64 | > | ATAAGTTATGCGa | | ATAAGTTATGCGa |
19 | 106 | 13 | 7.145 | > | AATGGACATTCGt | | AATGGACATTCGt |
2 | 105 | 13 | 8.133 | > | AATGGGAATTCCa | | AATGGGAATTCCa |
3 | 101 | 13 | 5.093 | > | AAAAGGCACGCGg | | AAAAGGCACGCGg |
4 | 100 | 13 | 7.4 | > | GAATCGAGTTTGg | | GAATCGAGTTTGg |
5 | 106 | 13 | 9.009 | > | CTAAGAAATTCCt | | CTAAGAAATTCCt |
6 | 112 | 13 | 9.026 | > | GAATGAAGTATGa | | GAATGAAGTATGa |
7 | 107 | 13 | 7.379 | < | tAACATTTAATTG | | CAATTAAATGTTa |
8 | 116 | 13 | 5.948 | > | CAGTGTAGTTGGg | | CAGTGTAGTTGGg |
9 | 118 | 13 | 8.919 | > | AAATGAATTTTCt | | AAATGAATTTTCt |
The list of sites
1 CAAAGATATTTCc
10 CAATGTAATTTCa
11 GATTGGAATGGGa
12 CAATGTAATTCGa
13 AAATGTAAGAGGg
14 CATACATATTCTa
15 ATATCAAAAATGt
16 AAAACGCATTTCg
17 GAAAGAAATAGTt
18 ATAAGTTATGCGa
19 AATGGACATTCGt
2 AATGGGAATTCCa
3 AAAAGGCACGCGg
4 GAATCGAGTTTGg
5 CTAAGAAATTCCt
6 GAATGAAGTATGa
7 CAATTAAATGTTa
8 CAGTGTAGTTGGg
9 AAATGAATTTTCt