The sampler was looking for sites on both strands of 38 sequences of length from 222 through 232.
The site length found is 11.
The sampler has tested the lengths in [6,16].
The motif is formed by 38 motif sites.
All the positions are 0-based.
The description of sitesGene Id | Position | Length | Score | Direction | Site in sequence | | Site-as-in-motif |
1 | 105 | 11 | 9.126 | > | TgAcTTTTCGc | | TgAcTTTTCGc |
10 | 105 | 11 | 11.86 | < | gGGGAAAtTcC | | GgAaTTTCCCc |
11 | 106 | 11 | 10.09 | < | gGGAAAAgCcC | | GgGcTTTTCCc |
12 | 103 | 11 | 3.518 | < | aAGAAGAaTaA | | TtAtTCTTCTt |
13 | 108 | 11 | 7.446 | > | TgGtTTATCTa | | TgGtTTATCTa |
14 | 110 | 11 | 10.76 | > | TgAaTTTTCCa | | TgAaTTTTCCa |
15 | 107 | 11 | 7.066 | > | TtAtATTCCCa | | TtAtATTCCCa |
16 | 111 | 11 | 8.862 | > | GtAcTTTCCGc | | GtAcTTTCCGc |
17 | 110 | 11 | 10.78 | > | GgAtTTTCCTg | | GgAtTTTCCTg |
18 | 109 | 11 | 11.26 | < | gCGGAAAtTcC | | GgAaTTTCCGc |
19 | 107 | 11 | 4.962 | > | GaAaTTTTTCc | | GaAaTTTTTCc |
2 | 114 | 11 | 9.656 | > | TgGaTTTTCGg | | TgGaTTTTCGg |
20 | 109 | 11 | 5.019 | > | TgGcTTTTATa | | TgGcTTTTATa |
21 | 113 | 11 | 10.24 | > | TtAtTTTCCGc | | TtAtTTTCCGc |
22 | 113 | 11 | 6.539 | < | tCGAACAaTaA | | TtAtTGTTCGa |
23 | 107 | 11 | 4.432 | < | tCGGAACcCaA | | TtGgGTTCCGa |
24 | 112 | 11 | 7.434 | > | TtGaTTCCCGc | | TtGaTTCCCGc |
25 | 109 | 11 | 5.082 | > | CgAtTTCCCTg | | CgAtTTCCCTg |
26 | 109 | 11 | 5.52 | < | gGGAAACtTtC | | GaAaGTTTCCc |
27 | 108 | 11 | 7.569 | < | gCGGAATtCcA | | TgGaATTCCGc |
28 | 110 | 11 | 7.322 | > | GtAtTTCCCTg | | GtAtTTCCCTg |
29 | 109 | 11 | 10.5 | > | GtAaTTTCCCa | | GtAaTTTCCCa |
3 | 105 | 11 | 8.833 | > | GcGaTTTTCTc | | GcGaTTTTCTc |
30 | 108 | 11 | 8.978 | > | GgGgTTTTCTa | | GgGgTTTTCTa |
31 | 108 | 11 | 5.24 | < | tGGGTCAtCcC | | GgGaTGACCCa |
32 | 108 | 11 | 11.16 | < | cGGGAAAaTcC | | GgAtTTTCCCg |
33 | 109 | 11 | 4.511 | > | GgGtTGGCCCg | | GgGtTGGCCCg |
34 | 109 | 11 | 10.6 | > | GtGtTTTCCGc | | GtGtTTTCCGc |
35 | 108 | 11 | 12.12 | < | gGGGAAAaCcC | | GgGtTTTCCCc |
36 | 106 | 11 | 11.3 | > | TgGtTTTCCCa | | TgGtTTTCCCa |
37 | 106 | 11 | 9.281 | < | gGGAGAAaCcC | | GgGtTTCTCCc |
38 | 106 | 11 | 11.05 | > | TgGaTTTCCCa | | TgGaTTTCCCa |
4 | 106 | 11 | 9.289 | > | GcAtTTTCCCa | | GcAtTTTCCCa |
5 | 107 | 11 | 9.07 | < | gAGAAAAcCcA | | TgGgTTTTCTc |
6 | 107 | 11 | 10.5 | < | cAGAAAAaTcC | | GgAtTTTTCTg |
7 | 107 | 11 | 8.471 | < | gAGAAAAtCgA | | TcGaTTTTCTc |
8 | 106 | 11 | 10.93 | < | gGGAAAAaCaC | | GtGtTTTTCCc |
9 | 107 | 11 | 10.53 | > | GgAaTTTCCTg | | GgAaTTTCCTg |
The list of sites
1 TgAcTTTTCGc
10 GgAaTTTCCCc
11 GgGcTTTTCCc
12 TtAtTCTTCTt
13 TgGtTTATCTa
14 TgAaTTTTCCa
15 TtAtATTCCCa
16 GtAcTTTCCGc
17 GgAtTTTCCTg
18 GgAaTTTCCGc
19 GaAaTTTTTCc
2 TgGaTTTTCGg
20 TgGcTTTTATa
21 TtAtTTTCCGc
22 TtAtTGTTCGa
23 TtGgGTTCCGa
24 TtGaTTCCCGc
25 CgAtTTCCCTg
26 GaAaGTTTCCc
27 TgGaATTCCGc
28 GtAtTTCCCTg
29 GtAaTTTCCCa
3 GcGaTTTTCTc
30 GgGgTTTTCTa
31 GgGaTGACCCa
32 GgAtTTTCCCg
33 GgGtTGGCCCg
34 GtGtTTTCCGc
35 GgGtTTTCCCc
36 TgGtTTTCCCa
37 GgGtTTCTCCc
38 TgGaTTTCCCa
4 GcAtTTTCCCa
5 TgGgTTTTCTc
6 GgAtTTTTCTg
7 TcGaTTTTCTc
8 GtGtTTTTCCc
9 GgAaTTTCCTg