Looking for DNA motifs Gibbs sampler (SeSiMCMC) result.

Input FastA file name: 50225_0_03_MAR_21_25_11_extlz_sesimcmc.fasta

The best information content for different site lengthes:

Length
6-0.0551455
7-0.0416991
8-0.0369008***
9-0.0427797
10-0.0639202
11-0.0506347
12-0.0582857

The sampler was looking for sites on both strands of 48 sequences of length from 212 through 250.

The site length found is 8.
The sampler has tested the lengths in [6,12].
The motif is formed by 48 motif sites.

All the positions are 0-based.

The description of sites
Gene IdPositionLengthScoreDirectionSite in sequenceSite-as-in-motif
110489.716<tTAATCCgcGGATTAa
1010485.975<tCAATCTgcAGATTGa
1110388.624>aAGATTAaaAGATTAa
1210382.729>aTGATCAaaTGATCAa
1310384.09<tTTAGCCtaGGCTAAa
1410484.421<cAAATCGcgCGATTTg
1510488.533<tTAAGCCgcGGCTTAa
1610785.925<cTAATTTtaAAATTAg
1710388.186<tTAAGCCtaGGCTTAa
1810488.186>aGGCTTAaaGGCTTAa
1910181.954<aAAAGTCatGACTTTt
210388.176>gAGATTAtgAGATTAt
2010388.523<aTAATCTgcAGATTAt
2111187.056>tGGCTTAgtGGCTTAg
2210788.922>gGGATTAtgGGATTAt
2310585.192<tTAAGCAtaTGCTTAa
2410287.761>cGGATTTgcGGATTTg
2510287.761>cGGATTTgcGGATTTg
2610587.415>aGGATTTgaGGATTTg
2710588.085>cGGCTTAtcGGCTTAt
2810183.21<gCAAGCCgcGGCTTGc
2910789.37>gGGATTAggGGATTAg
310485.928<aTAATCGcgCGATTAt
3010786.721>cGGATTGacGGATTGa
3110688.24>tGGATTAgtGGATTAg
3210285.477>aAAATTAtaAAATTAt
3310685.622<aTGATCCgcGGATCAt
3410287.441>gAGCTTAggAGCTTAg
3510287.787>cAGCTTAgcAGCTTAg
3610987.042>gGGATTAcgGGATTAc
3710689.37>gGGATTAagGGATTAa
3810788.971>cAGATTAgcAGATTAg
3910587.761<tAAATCCgcGGATTTa
410389.37>gGGATTAggGGATTAg
4010387.056>tGGCTTAatGGCTTAa
4110187.313<aAAATCCgcGGATTTt
4210487.441>gAGCTTAagAGCTTAa
4310788.624>gAGATTAggAGATTAg
4410285.582<tGAATCCtaGGATTCa
4510788.971<cTAATCTgcAGATTAg
4610785.477<aTAATTTtaAAATTAt
4710385.477>aAAATTAtaAAATTAt
4810882.669<cAAATATtaATATTTg
510689.37>gGGATTAggGGATTAg
611289.716>cGGATTAacGGATTAa
710487.792<aTAATCCatGGATTAt
812888.624<tTAATCTcgAGATTAa
911288.533>cGGCTTAgcGGCTTAg

The list of sites
 1    cGGATTAa
 10   cAGATTGa
 11   aAGATTAa
 12   aTGATCAa
 13   aGGCTAAa
 14   gCGATTTg
 15   cGGCTTAa
 16   aAAATTAg
 17   aGGCTTAa
 18   aGGCTTAa
 19   tGACTTTt
 2    gAGATTAt
 20   cAGATTAt
 21   tGGCTTAg
 22   gGGATTAt
 23   aTGCTTAa
 24   cGGATTTg
 25   cGGATTTg
 26   aGGATTTg
 27   cGGCTTAt
 28   cGGCTTGc
 29   gGGATTAg
 3    gCGATTAt
 30   cGGATTGa
 31   tGGATTAg
 32   aAAATTAt
 33   cGGATCAt
 34   gAGCTTAg
 35   cAGCTTAg
 36   gGGATTAc
 37   gGGATTAa
 38   cAGATTAg
 39   cGGATTTa
 4    gGGATTAg
 40   tGGCTTAa
 41   cGGATTTt
 42   gAGCTTAa
 43   gAGATTAg
 44   aGGATTCa
 45   cAGATTAg
 46   aAAATTAt
 47   aAAATTAt
 48   aATATTTg
 5    gGGATTAg
 6    cGGATTAa
 7    tGGATTAt
 8    gAGATTAa
 9    cGGCTTAg