The sampler was looking for sites on both strands of 11 sequences of length from 219 through 242.
The site length found is 12.
The sampler has tested the lengths in [6,12].
The motif is formed by 11 motif sites.
All the positions are 0-based.
The description of sitesGene Id | Position | Length | Score | Direction | Site in sequence | | Site-as-in-motif |
1 | 125 | 12 | 7.467 | > | ccTCGTTAtCGC | | ccTCGTTAtCGC |
10 | 101 | 12 | 6.042 | < | GTGgTCGCTGcg | | cgCAGCGAcCAC |
11 | 101 | 12 | 6.911 | > | gcCAATGAtCGA | | gcCAATGAtCGA |
2 | 108 | 12 | 10.67 | > | caCGATTAgCAC | | caCGATTAgCAC |
3 | 102 | 12 | 7.499 | < | GTTaTAATTTat | | atAAATTAtAAC |
4 | 110 | 12 | 5.724 | < | TTGcTAAACAtg | | caTGTTTAgCAA |
5 | 112 | 12 | 6.883 | < | GCGaAAATCGca | | tgCGATTTtCGC |
6 | 108 | 12 | 9.109 | > | ctAAATTAcCGC | | ctAAATTAcCGC |
7 | 100 | 12 | 10.38 | < | GTCaTAATTGcg | | cgCAATTAtGAC |
8 | 105 | 12 | 8.768 | > | aaCCATTAaCAC | | aaCCATTAaCAC |
9 | 127 | 12 | 7.321 | > | ggCCATTAcAAA | | ggCCATTAcAAA |
The list of sites
1 ccTCGTTAtCGC
10 cgCAGCGAcCAC
11 gcCAATGAtCGA
2 caCGATTAgCAC
3 atAAATTAtAAC
4 caTGTTTAgCAA
5 tgCGATTTtCGC
6 ctAAATTAcCGC
7 cgCAATTAtGAC
8 aaCCATTAaCAC
9 ggCCATTAcAAA