The sampler was looking for sites on both strands of 21 sequences of length from 215 through 241.
The site length found is 10.
The sampler has tested the lengths in [6,10].
The motif is formed by 21 motif sites.
All the positions are 0-based.
The description of sitesGene Id | Position | Length | Score | Direction | Site in sequence | | Site-as-in-motif |
1 | 102 | 10 | 8.812 | > | TtaTAGtaaA | | TtaTAGtaaA |
10 | 101 | 10 | 3.638 | < | AtatACAttT | | AaaTGTataT |
11 | 109 | 10 | 7.602 | > | AcaTAGccaA | | AcaTAGccaA |
12 | 107 | 10 | 7.308 | < | TttgCTAaaA | | TttTAGcaaA |
13 | 107 | 10 | 3.782 | > | TatTATataG | | TatTATataG |
14 | 104 | 10 | 7.029 | > | TaaTAGaagT | | TaaTAGaagT |
15 | 113 | 10 | 5.389 | < | AgtgCTAatC | | GatTAGcacT |
16 | 104 | 10 | 5.772 | > | TgaTAGgcaA | | TgaTAGgcaA |
17 | 104 | 10 | 8.64 | > | TaaTAGttaT | | TaaTAGttaT |
18 | 104 | 10 | 7.878 | > | TaaTAGtttA | | TaaTAGtttA |
19 | 103 | 10 | 6.086 | > | TcgTAGgaaA | | TcgTAGgaaA |
2 | 102 | 10 | 5.67 | > | AaaTGGttgA | | AaaTGGttgA |
20 | 103 | 10 | 5.822 | > | TatTAGagcA | | TatTAGagcA |
21 | 115 | 10 | 4.442 | < | TgggCTAggT | | AccTAGcccA |
3 | 108 | 10 | 6.871 | > | AatTGGcaaA | | AatTGGcaaA |
4 | 114 | 10 | 7.819 | < | TtgtCTAtgT | | AcaTAGacaA |
5 | 102 | 10 | 6.576 | < | AaaaCTAttT | | AaaTAGtttT |
6 | 103 | 10 | 7.422 | > | AacTAGtacA | | AacTAGtacA |
7 | 101 | 10 | 7.425 | > | AaaTAAtaaA | | AaaTAAtaaA |
8 | 105 | 10 | 6.835 | < | CtttCTAttC | | GaaTAGaaaG |
9 | 103 | 10 | 3.386 | < | TgtcCTAcaC | | GtgTAGgacA |
The list of sites
1 TtaTAGtaaA
10 AaaTGTataT
11 AcaTAGccaA
12 TttTAGcaaA
13 TatTATataG
14 TaaTAGaagT
15 GatTAGcacT
16 TgaTAGgcaA
17 TaaTAGttaT
18 TaaTAGtttA
19 TcgTAGgaaA
2 AaaTGGttgA
20 TatTAGagcA
21 AccTAGcccA
3 AatTGGcaaA
4 AcaTAGacaA
5 AaaTAGtttT
6 AacTAGtacA
7 AaaTAAtaaA
8 GaaTAGaaaG
9 GtgTAGgacA