Kulakovskiy I.V., Favorov A.F., Makeev V.J. (2009) Motif discovery and motif finding from genome-mapped DNase footprint data. Bioinformatics 25(18): 2318-2325.

<up> DMMPMM motif BR_Z1 comparison [dmmpmm_compare_html]

motif alignment

Bigfoot
Bergman
Down
Pollard
SeSiMCMC

motif similarity

Bigfoot Pollard Down Bergman SeSiMCMC
Bigfoot 1.0 0.0833 0.1583 0.1438 0.2444
Pollard 0.0833 1.0 0.0917 0.1133 0.1383
Down 0.1583 0.0917 1.0 0.2132 0.169
Bergman 0.1438 0.1133 0.2132 1.0 0.1587
SeSiMCMC 0.2444 0.1383 0.169 0.1587 1.0