1. ADASTRA logo

    ADASTRA: database of allele-specific binding

    The database of Allelic Dosage-corrected Allele-Specific human Transcription factor binding sites provides a genomic map of allele-specific binding at more than 300 thousand single-nucleotide polymorphisms constructed by meta-analysis of thousands of ChIP-Seq experiments, click here.

  2. PASIO logo

    PASIO: Poission segmentation for adaptive smoothing of genomic coverage profiles

    Pasio is a software tool to simplify and denoise short read coverage profiles arising from high-throughput sequencing data such as ChIP-Seq, DNase-Seq, ATAC-Seq and other -Seq experiments, read more.

  3. PAPOLARITY logo

    PAPOLARITY: Poisson-assisted transcript polarity estimation

    Papolarity is a Python package for analysis of positional biases in transcript-level short read coverage profiles obtained by ribosome profiling (Ribo-Seq) or other transcriptomic -Seq data, read more.

External links

Github